Microvirga terrae: HPT29_003245
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Entry
HPT29_003245 CDS
T09145
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtez03032
]
HPT29_003245
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_003245
Enzymes [BR:
mtez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPT29_003245
DNA replication proteins [BR:
mtez03032
]
Prokaryotic type
DNA Topoisomerases
HPT29_003245
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPT29_003245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UVF20184
LinkDB
All DBs
Position
686388..687557
Genome browser
AA seq
389 aa
AA seq
DB search
MTEQNATAENVVDPRDAAEAAGLRYVSDEEPGIRRKKSGKGFAYTGPDGKTIGDKSILER
IKSLAIPPAYTDVWICAKANGHIQATGRDAKGRKQYRYHPAFREVRESTKYEHMLEFARG
LPAIRTTIDEHMSLRGLPREKVLATVVHLLENTLIRVGNSDYVKQNKSYGLTTLRDPHVK
VDGGELRFQFKGKSGKTWRLQVKDRRIAKIVKACQDLPGQDLFQYLDENGEQQSVTSADV
NAYLKEITGSEITAKDFRTWAGTVLAALALAEFEAFDSDAKAKKNIRAAIEKVSARLGNT
PSICRKCYVHPEVFSSYLDGGLLLDIKEEIETELREDLASLKPEEAAVLALLEQRISREV
EKQPERKPAKKRRSPSPRKSDKAQPEMRV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacagaacgccaccgccgaaaacgtcgtcgacccgcgtgacgccgccgaggcc
gcggggctgcgatacgtgtccgacgaggagcccggcatccggcgcaagaaatccggcaag
ggcttcgcctataccggacccgacggcaagacgatcggcgacaagtcgatcctggagcgc
atcaagtcgctggcgatcccgcccgcctacacggacgtgtggatctgcgcgaaggcgaac
ggccacatccaggcgacgggccgcgacgccaagggccgcaagcagtaccgctaccatccg
gccttccgggaggtccgcgagagcacgaaatacgagcacatgctggagttcgcccgcggg
ttgccggccatccgaacgaccatcgacgagcatatgagcctgcgcggcctgccgcgcgag
aaggtgctggccacggtggtgcatctgctcgagaacacgctcatccgcgtgggcaattcc
gattacgtcaagcagaacaagagctatggcctcaccaccctgcgcgacccgcatgtgaag
gtggacggcggcgaattgcgctttcagttcaagggcaagagcggcaagacgtggcgcctg
caggtcaaggaccggcgcatcgccaagatcgtcaaggcctgccaggatctgcctgggcag
gatctgtttcagtacctcgacgagaacggcgagcagcaatcggtcacctcggccgacgtg
aacgcctatctgaaggagatcacgggaagcgagatcacggccaaggattttcggacttgg
gccggtactgttctggcggccctcgctctggccgaattcgaggcgttcgacagcgacgcg
aaggccaagaagaacatccgggcggccatcgagaaggtctccgcccgcctcggcaacacg
ccaagcatctgccgcaaatgctacgtgcatccggaagtcttctcctcctatctcgacgga
ggcctccttctggatatcaaggaagaaatcgaaaccgagctgcgcgaggatctcgccagc
ctcaagcccgaggaggcggccgtcctggcgctgctggagcagcgcatctcccgggaggtc
gagaagcagccggagaggaagcccgccaagaagcgccgcagcccgtcgcccaggaaatcg
gacaaggctcagcccgagatgcgggtttga
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