Microvirga terrae: HPT29_006765
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Entry
HPT29_006765 CDS
T09145
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mtez
Microvirga terrae
Pathway
mtez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPT29_006765 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_006765 (uvrB)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPT29_006765 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPT29_006765 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
UB2H
DUF2963
SWI2_SNF2
Microtub_bd
Kinesin
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
UVF20824
UniProt:
A0ABY5RX29
LinkDB
All DBs
Position
complement(1419792..1422497)
Genome browser
AA seq
901 aa
AA seq
DB search
MAKSPKKPKLSTGKASKPELKPLDPYLADLLNPAVNREREAAEGFAERAQETFIHGDIAD
VDPALAKKLGLKGPDDGPDVAEELGELSPGSGVSATVDALSKLLTEGDPRFKNGTLWVPH
RPPRPEKSEGGIPFKIKSDFTPSGDQPTAIAELVDGVRRAERDQVLLGVTGSGKTFTMAK
VIEETQRPALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEK
ESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYTAMTFSVKVGERIEQRQ
LIADLVALQYKRIQSDFARGTFRVRGDVIELFPAHLEDRAWRIGLFGDEIESIVEFDPLT
GKKTNDLQFVKVYANSHYVTPRPTLQQAVKGIQDELQHRLQELARMGRLLEAQRLEQRTQ
FDLEMIEATGVCNGIENYSRYLTGRKPGEPPPTLFEYLPDNALVFTDESHVTVPQIGGMY
RGDFRRKATLAEYGFRLPSCLDNRPLRFEEWDAMRPQSVHVSATPAKWEMEQTGGVFVEQ
VIRPTGLVDPVVEIRPARSQVDDLVHEVKELAANGYRTLVTTLTKRMAEDLTEYMHENGI
RVRYMHSDIDTLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRS
ETSLVQTIGRAARNVEGKAILYADKITGSMERAIAETNRRREKQLAYNAEHGITPQSVKK
NIADILESVYERDHVSVDTGLADRTVGHNLKAVIADMEKRMRESAANLEFEEAARLRDEL
KRLQATELAISDDPMARQSDVEKEAGRYGGSRKYGRSANLPPKGLPPSPDGATAGDEESD
AYGPTGKGRSDEGTRVRKPGLDEMGPGTDREVPLNYRERPAARSTQGFAGQKPKYKGRKG
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcacccaagaagcccaagctttccaccgggaaggcgtccaagcctgagctc
aagccgctggatccgtatctggccgatctcctcaatccggcggtcaaccgggagcgggag
gcggccgaggggttcgccgagcgggcgcaggagaccttcatccacggcgacatcgccgat
gtcgacccggcgctcgccaagaagctcggcctcaaggggccggatgacgggccggacgtg
gccgaggagctgggcgagctgtccccgggctccggcgtgtcggcgaccgtcgatgcgctc
tcgaagctcctcaccgagggggacccgcgcttcaagaacggcacgctctgggtgccgcac
cgcccgcctcggcccgagaagtcggaaggcggcatcccgttcaagatcaaatccgacttc
acgccctcgggcgaccagccgaccgcgatcgccgagctggtggacggcgtgcgccgggcc
gagcgtgaccaggtgctgctcggcgtcacgggctcgggcaagaccttcaccatggccaag
gtaatcgaggagacgcagcgccccgccctcatcctggcgcccaacaaaacgctcgccgcc
cagctctacggcgagttcaagtcgttcttcccggacaacgcggtcgagtacttcgtgtcc
tattacgattactaccagcccgaggcctatgtgccgcgctcggacaccttcatcgagaag
gaaagctccatcaacgagcagatcgaccggatgcgccactcggcgacccgcgcgctgctc
gagcgcgacgacgtgatcatcgtggcgtccgtgtcgtgcatctacggtatcggatcggtc
gagacctatacggccatgacgttctccgtgaaggtgggcgagcgcatcgagcagcgccag
ctcatcgcggatctggtggccctgcagtacaagcgcatccagagcgacttcgcccgcggc
accttccgggtgcgcggcgacgtgatcgagctctttcccgcccacttggaggaccgcgcc
tggcgcatcggcctcttcggcgacgagatcgagtccatcgtcgagttcgatccgctcacc
ggcaagaagaccaacgacctgcaattcgtgaaggtctacgcgaactcgcactacgtgacg
ccgcgcccgaccctgcagcaggccgtgaagggcatccaggacgagctgcagcaccgcctg
caggagctcgcccgcatgggccgcctgctcgaggcgcagcggctcgagcagcgcacgcag
ttcgacctcgagatgatcgaggccacgggcgtgtgcaacggcatcgagaactattcgcgc
tatctcaccggccgcaagccgggcgagccgcccccgaccctgttcgagtacctgcccgac
aacgccctcgtgttcaccgacgagagccacgtgaccgtgccgcagatcggcggcatgtac
cggggcgacttccgccgcaaggcgacgctcgcggaatacggtttccgcctgccctcgtgc
ctcgacaaccgccccctgcgtttcgaggaatgggacgccatgcggccgcaatcggtccac
gtgtcggcgacgccggccaagtgggagatggagcagaccggcggcgtcttcgtcgagcag
gtcatccgccccacgggcctcgtcgatcccgtggtggagatcaggccggcgcgaagccag
gtcgacgatctcgtgcacgaggtgaaggagctcgcagcgaacggctaccgcaccctcgtg
accacgctcaccaagcgcatggccgaggacctcaccgagtacatgcacgagaacggcatc
cgcgtgcgctacatgcactcggacatcgacacgctggagcgcatcgagatcatccgggat
ctcaggctcggcgccttcgacgttctcatcggcatcaacctgctgcgcgagggcctcgac
attcccgaatgcgccctggtggccattctcgacgcggacaaggaaggcttcctgcgctcg
gaaacgtcgctggtgcagaccatcggccgcgcggcccgtaacgtggaaggcaaggcgatc
ctctacgcggacaagatcaccggctccatggagcgcgccatcgcggagaccaaccgccgc
cgcgagaagcagctcgcctacaacgccgagcacggcatcacgccgcaatcggtgaagaag
aacatcgcggacatcctggagagcgtctacgagcgcgaccacgtgtcggtcgacacaggc
ctcgccgacaggaccgtgggccacaacctcaaggccgtcatcgccgacatggaaaagcgc
atgcgcgagtccgcggcgaacctggaattcgaggaggcggcccgcctgcgcgacgagctc
aagcgcctgcaggcgaccgagctcgccatcagcgacgacccgatggcgcgccagagcgac
gtggagaaggaagcgggccggtacggcggctcgcgcaagtacggccgcagcgccaacctg
ccgccgaagggtctgccgccctcgcccgacggcgccacggcgggggacgaggaatccgac
gcctacgggccaaccggcaaggggcggtccgacgagggcacccgggtgcgcaagcccggc
ctcgacgagatgggcccgggcacggaccgggaggtgccgctcaactaccgcgaacgcccg
gccgcgcgctcgacgcagggcttcgcgggccagaagccgaaatacaagggacgcaagggg
cggtaa
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