Microvirga terrae: HPT29_008000
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Entry
HPT29_008000 CDS
T09145
Name
(GenBank) HAMP domain-containing protein
Organism
mtez
Microvirga terrae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
RNase_Y_N
PMC2NT
Motif
Other DBs
NCBI-ProteinID:
UVF21053
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All DBs
Position
1699898..1705747
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AA seq
1949 aa
AA seq
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MSQVETTTSQLDPRLLLKTLRAFRKGDFSARLPSDLTGIDGEIAEAFNDIAELNHGLAQE
LERVAKVVGKEGRIEERGRLAGATGCWSECVDSVNAMIGDIVQPTVEVARVIGAVAKGDL
SQTIDLATDGRPLRGEFLRIGKVVNTMVGQLGSFASEVTRVAREVGSEGKLGGQAKVKGV
AGTWKDLTENVNLMAANLTGQVRNIAEVTTAVANGDLSKKITVDVKGEILELKDTINTMV
DQLNSFASEVTRVAKEVGSEGKLGGQAQVRGVGGVWKDLTDNVNMMAANLTGQVRNIAEV
TTAVARGDLSKKITVDVKGEILALKSTINTMVDQLNSFASEVTRVAKEVGSEGKLGGQAQ
VEGVGGVWRDLTENVNMMGSNLTAQVRNIADVTTAVANGDLSKKITVEVRGEILELKNTI
NTMVDQLNSFASEVTRVAKEVGSEGKLGGQAQVRGVAGTWKDLTDNVNLMAANLTGQVRN
IAEVTTAVANGDLSKKITVEVRGEILELKSTINTMVDQLNSFAGEVTRVAKEVGSEGKLG
GQARVEGVAGTWKDLTDNVNLMAANLTGQVRNIADVTTAVANGDLSKKITVDVRGEILEL
KSTINTMVDQLNSFAGEVTRVAREVGTEGKLGGQAQVRGVGGVWKDLTDNVNMMAANLTG
QVRNIAEVTTAVANGDLSKKITVAVEGEILELKSTINTMVDQLNSFAGEVTRVAREVGTE
GKLGGQAQVRGVGGVWKDLTDNVNMMAANLTGQVRNIAEVTTAVANGDLSKKITVDVRGE
ILELKSTINTMVDQLNSFASEVTRVAREVGIEGKLGGQAQVRGVAGTWKDLTDNVNMMAN
NLTGQVRGIASVVTAVAEGDLKRKLTVDAKGEIAALAETINEMIDTLATFADQVTNVARE
VGVEGKLGGQARVPGAAGLWRDLTDNVNQLAANLTTQVRAIADVATAVTKGDLTRSISVE
ASGELASLKDNVNEMIRNLRDTTLKNAEQDWLKTNLAKFTRMLQGERDLTTVSNMILSEI
APLVNAQQGVFYTVETDGSEPILEMVASYAFTERKHLNNRFRLREGLVGQVAYERKRILL
TNVPGDYITISSALGEAPPLNIIVLPVLFEQEVKAVIELASFSRFSETHQSFLEQLTESI
GIVLNTIAANMRTEGLLKQSQLLTTELQSQQEELRNTNDRLEQQAATLRQSEELLRQQQE
ALQKTNEELEDKAQLLELQKREVETKNQEVSVAKTALEEKAEQLSLTSRYKSQFLANMSH
ELRTPLNSLLILSKLLTENSDGNLTDKQREFAKTIHAAGSDLLSLINDILDLSKIESGTV
SLEVSSVAFKDLVDNMERTFRQVAEERRLDFHVEVDPKLPPAIRTDSKRLQQVLRNLLSN
AFKFTERGGVTLQIGSAEGTPLRAGSQWIAMSVTDTGIGIPEEKQRIIFEAFQQADGTTS
RKYGGTGLGLSISREIARLLGGEIVVSSTPGSGSTFTLFVPVDPPASHGIAGSESAARPN
GNGAGQYLASDESAGSMIRQPSAAMALSASLDDRHAITGGDRVVLIIEDDAMFASVLLEL
AREEGFRGLIAMDGASALALAHRYKPHAITLDIGLPDMDGWALLDLLKHDPRTRHVPIHV
ISVDDQKKRGLKAGAFGFLEKPVDREALMGALNRTKEFIDRPVKKLLLVEDDDNQRMSLS
ELMKSEQVDVTAVGTAESALEVIQARQFDCAIVDLGLPDLPGAELIERIRKTKGGEELPI
VIYTGQDLTKSDERRLQGIAATLIVKGEGSSERLLNDTALFLHRTISAIPEEKHIIVERR
SDSSLEGRKVLIIDDDMRNIFSLTSALEQHGISVVFAENGLEGIEKLQANPDLDVALVDI
MMPEMDGYETMRAIRKIPRYRDLPLVAVTAKAMMGDREKCLEAGATDYVSKPVDVDQLLA
VLRVQLSRSTYIPDGRIAPNGAAETGLNT
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagtcgaaaccaccacttcgcagcttgatcccaggctgctgctcaaaaccttg
cgcgccttcaggaaaggcgatttctcggctcgtctgccgtccgatctgaccggcatcgac
ggcgagatcgcggaggctttcaacgatatcgcagagctgaaccacggcctcgcccaggaa
ctggagcgggtcgccaaggtcgtcggtaaggaagggcggatcgaggagcgcgggcggctg
gcgggggcgaccggctgctggagcgaatgcgtcgattccgtcaacgccatgatcggcgac
atcgtgcagccgaccgtcgaggtcgcacgcgtgatcggcgctgtcgcgaagggcgacctg
agccagacgatcgacctcgcgacggacggacgtccgctccggggcgagttcctgcgcatc
ggcaaggtggtcaataccatggtggggcagctcggcagcttcgcctccgaggtgacccgc
gtggcccgcgaggttggatcggaaggtaagctcggcggccaggcgaaggtgaagggtgtc
gccggcacctggaaggatctgaccgagaacgtgaacctgatggcggccaatctgactggc
caggtccgcaacatcgccgaggtcactaccgcggtggcgaacggggatctctccaagaag
attactgtggacgtaaagggcgagatcctggagctgaaggacaccatcaacaccatggtg
gaccagctgaactcgttcgcgtccgaggtgacccgcgtggcgaaggaggtgggctccgaa
ggcaagctcggtggccaggcccaggtgcgtggggtcggcggcgtctggaaggatctgacc
gacaacgtgaacatgatggcggccaaccttaccggccaggtgcgcaacatcgccgaggtg
accaccgccgtcgcccggggcgacctgtccaagaagatcaccgtggacgtgaagggcgag
atcctggccctcaagtcgaccatcaacacgatggtcgaccagctgaattcgtttgcctcg
gaagtgacccgtgtcgccaaggaagtgggctccgagggcaagctcggcggacaggcgcag
gtcgagggcgtcggcggcgtctggcgtgacctcaccgagaacgttaacatgatgggctcg
aacctcaccgcgcaggttcgaaacattgccgacgtgacgaccgcggtggcgaacggcgac
ctgtccaagaagatcaccgtggaagtccggggcgagatcctggagctgaagaacaccatc
aacaccatggtggaccagttgaactccttcgcgtcggaagtgactcgtgtggcgaaggag
gtgggatcggaaggcaagctcggcggccaggcgcaggtgcgcggcgtcgccggcacctgg
aaggacctcaccgacaacgtgaacctgatggcggcgaacctgaccggccaggtgcgcaac
atcgccgaagtgaccaccgccgtcgcgaacggcgacctgtccaagaagatcaccgtggag
gtcaggggcgagatcctggagctgaaatcgaccatcaacaccatggtggatcagctcaac
tccttcgccggggaagtgacccgcgtcgcgaaggaagtgggctcggaaggcaagctcggc
ggccaggcccgcgtggagggcgtggccggcacctggaaggatctgaccgacaacgtcaac
ctgatggcggcgaacctgacgggccaggtccgtaacattgccgacgtgacgacggccgtc
gcgaacggcgatttgtccaagaagatcaccgtcgatgtgcgcggcgagatcctggagctg
aagtcgaccatcaacaccatggtggatcagctgaactccttcgcgggcgaggtgacgcgt
gtggcccgcgaggtgggcacggaaggaaagctcggcggccaagcccaggtgcgtggggtc
ggcggcgtgtggaaggacctcaccgacaacgtgaacatgatggcggcgaacttgaccggt
caggtgcgtaacatcgccgaagtcaccaccgcagtggcgaatggtgacctgtccaagaag
atcaccgtcgcggtcgagggcgaaattctcgagctgaagtcgaccatcaacaccatggtg
gatcagctgaactccttcgcgggcgaggtgacgcgtgtggcccgcgaggtgggcacggaa
ggaaagctcggcggccaagcccaggtgcgtggggtcggcggcgtgtggaaggacctgacc
gacaacgtgaacatgatggcggccaacctgaccggccaagtccgcaacatcgcggaagtg
acgacagcggtggcgaacggcgacctctccaagaagatcaccgtcgatgtgcgcggcgag
atcctggagctgaagtcgaccatcaacaccatggtggatcagctcaactccttcgcgtcc
gaggtgacccgcgtggcccgcgaggtgggcatcgagggcaagctcggtgggcaggcgcag
gtgcgcggggtcgccggcacctggaaggacctcaccgacaacgtcaacatgatggcgaat
aacctcaccggccaggtgcgcggcatcgccagcgtggtgacggcggtcgccgagggcgat
ctcaagcgcaagctgacggtggatgccaagggcgaaatcgccgcgctggccgaaaccatc
aacgaaatgatcgacacgctcgccaccttcgccgatcaggtgactaacgtggcccgcgaa
gtgggcgtggaaggcaagctcggcgggcaggcgagggtgccgggcgccgccggcctgtgg
cgcgatctcacggataacgtgaaccagctcgcggccaacctgaccactcaggtgcgcgcc
atcgcggatgtggccaccgccgtgaccaagggcgatctgacccggtcgatttcggtggaa
gcctcgggcgagctggcctcgctcaaggacaacgtcaacgagatgatccgcaacctgcgc
gacacgacgctcaagaatgcggagcaggattggctgaagaccaatctcgccaagttcacc
cgcatgctgcagggcgagcgcgatctcaccaccgtgtccaacatgatcctgtcggagatc
gctccgctcgtgaacgcgcagcagggcgtgttctatacggtcgagaccgacgggagcgag
cccatcctggagatggttgcctcatacgcattcacggagagaaagcacctcaacaaccgg
ttccgtctgcgcgaaggtctggtcgggcaggtcgcctacgagaggaagaggatcctgctc
accaacgtgccgggcgactacatcaccatcagctcggccctcggcgaggcgccgcctctc
aacatcatcgtactgccggtgctgttcgaacaggaggtgaaggcggtcatcgagctcgcc
tccttcagccggttctcggagacgcaccagtccttcctcgagcagctcaccgagtcgatc
ggcatcgttctcaacaccatcgcggcgaacatgcggacggagggcctgctgaagcagtcg
cagctcctgaccaccgagctgcagagccagcaggaagagctgcggaacaccaacgaccgt
ctggagcagcaggctgcaaccctgcgtcagtcggaagagctcctgaggcaacagcaggaa
gcgcttcagaagaccaacgaggagctcgaggacaaggcgcagctgctcgagctccagaag
cgggaggtcgagaccaagaaccaggaagtgtccgtcgccaagacggccctggaggagaag
gccgagcagctttcgctgacctcgcgctacaagtcgcagttcttggccaacatgagccac
gagttgcggacgccgctgaactcgcttctgatcctgtcgaagctgctgaccgaaaactcg
gacggcaacctgaccgacaagcagagggagtttgcgaagaccatccacgcggcgggatcg
gatcttctctcgctcatcaacgacatcctggatttgtcgaagatcgagtccggcactgtc
agcctggaagtgtcgagcgtcgccttcaaggacctggtcgacaacatggagcgcaccttc
cgccaggtggcggaggaaagaaggctcgacttccatgtggaggtcgatcccaagctgccg
cccgccatccggacggattcgaagcggctgcagcaggtgctgcgcaacctcctgtcgaac
gcgttcaagttcacggagcgcggaggcgtgacgcttcaaatcggatcggccgagggaacg
cccttgagggcgggaagccagtggatcgctatgtcggtgaccgatacgggcatcggcatc
ccggaggagaagcagcgcatcatcttcgaggccttccagcaggcggacggcacgacaagc
cggaagtacggcggaaccggtctgggtctctcgatcagccgcgaaatcgcccgtctgctc
ggcggcgagatcgtggtgtcgagcacgccggggagcggctcgaccttcacgctcttcgtc
ccggtcgatcctccggccagtcacggaattgccggcagcgaatccgccgccagacccaac
ggaaatggagcagggcagtacctcgcctccgacgaatcggccggatcgatgatccgtcag
ccctcggccgcaatggccctttcggcctcgctcgacgatcggcacgcgatcaccggtggt
gatcgcgtggtgctcatcatcgaggacgacgcgatgttcgcctccgtcctgctggagctc
gcccgggaggagggcttcaggggactgatcgccatggacggggcatcggcccttgccctc
gcgcatcgctacaagccccatgcgatcacgctcgatatcggacttcccgacatggacggc
tgggcactcctcgatctgctcaagcacgatcctcgcacccggcatgtgcccatccacgtg
atctcggtcgacgatcagaagaagcgcggtctcaaggccggtgccttcgggttcctggag
aagcccgtcgaccgggaagctctcatgggagcgctcaaccgcaccaaggagttcatcgac
cggcccgtgaagaagctgcttctcgtcgaggatgacgacaatcagcgcatgagcctgtcc
gaactcatgaagagcgaacaggtcgacgtgaccgcggtgggaacggccgaaagtgccctg
gaggtgatccaggcgcggcagttcgactgcgcgatcgtcgatttgggtcttcccgacctt
cccggtgcggagctcatcgagcgcatccgcaagacgaagggaggcgaggagctgccgatc
gtcatctataccggtcaggacctgacgaagtccgatgagcgtcggctgcagggcatcgcc
gcgacgctcatcgtcaagggcgaaggctcgtccgagcgcctcctcaacgacacggctctc
ttcctgcaccggacgatcagcgccattccggaagaaaagcacatcatcgtcgagcggcgt
agcgacagttctctcgaaggccggaaggtgctgatcatcgacgatgacatgcgcaacatc
ttctccctgacgagcgcactcgagcagcatggaatctcggtcgtcttcgctgagaacgga
ctggaaggcatcgagaagctccaggcgaatccggatctcgacgtggcactcgtcgacatc
atgatgcccgagatggacggctacgagaccatgcgggccatccggaagattccgcgctac
cgtgaccttcccctcgttgcggtaacggcgaaggccatgatgggtgatcgcgagaagtgc
ctcgaggcgggtgcgaccgactacgtgtcgaaacctgtcgatgtggatcaactcctggcc
gtcttgcgcgttcagctcagccggagcacatatatcccggacgggaggattgctcccaat
ggtgccgcagagaccgggctgaacacatga
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