Microvirga terrae: HPT29_009350
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Entry
HPT29_009350 CDS
T09145
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mtez
Microvirga terrae
Pathway
mtez03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPT29_009350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtez03021
]
HPT29_009350
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_009350
Enzymes [BR:
mtez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPT29_009350
Transcription machinery [BR:
mtez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPT29_009350
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPT29_009350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
UVF21304
LinkDB
All DBs
Position
1970973..1971995
Genome browser
AA seq
340 aa
AA seq
DB search
MVVIQKNWQELIKPNKLEVAPGDDPKRIATVVAEPLERGFGTTLGNSLRRVLLSSLQGAA
VTAIHIDGVLHEFSSIPGVREDVTDIVLNVKTIAIKMQGEGAKRMTLRKTGPGAVTAGDI
NTIGDVQILNPDLVLCTLDEGAEIRMEFTVDTGKGYVPAERNRSEDAPIGLIPVDSLYSP
VKKVSYRIENTREGQILDYDKLIMTVETNGAVTPEDAVAYAARILQDQLQVFVNFEEPRK
EEAAAAAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGR
KSLNEIKEVLAGMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggttgtgatccaaaagaactggcaagagctgattaagccgaacaagcttgaagtcgcc
cccggtgacgatccgaagcgcatcgcgacggtcgtggccgagccgctcgagcgtggcttc
ggcacgacgctcggcaactcgctgcgccgggtcctcctgtcgtcgctccagggcgcggcc
gtgacggcgatccatatcgatggcgtgctgcacgagttctcgtccatcccgggcgtccgt
gaggacgtgaccgacatcgtcctcaacgtgaagacgatcgccatcaagatgcagggcgag
ggtgcgaagcgcatgacgctccgcaagaccggccctggcgccgtgaccgccggtgacatc
aacacgatcggcgacgtgcagatcctgaaccccgatctcgttctctgcaccctcgacgag
ggcgccgagatccgcatggagttcacggtcgacaccggcaagggctacgttccggccgag
cgcaaccgctccgaggacgctccgatcggactgatcccggtcgactcgctctatagcccg
gtgaagaaggtctcctatcgcatcgagaacacccgcgaaggccagattctcgactacgac
aagctgatcatgacggtcgagaccaacggcgccgtgacccctgaggatgccgtggcctat
gccgcccggatcctgcaggaccagctccaggttttcgtcaacttcgaagagccgcgcaag
gaagaggccgctgccgccgcgccgcagctgccgttcaacccggctcttctcaagaaggtc
gacgagctcgagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctat
atcggcgacctgatccagaagtcagaggcggaaatgctccgcaccccgaacttcggccgc
aagtcgctcaacgagatcaaggaagttctggccggcatgggcctgcacctcggcatggac
gtgccgggctggccgccggagaatatcgaagacctcgcgaagcgcttcgaagagcactac
taa
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