Microvirga terrae: HPT29_012220
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Entry
HPT29_012220 CDS
T09145
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtez03032
]
HPT29_012220 (topA)
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_012220 (topA)
Enzymes [BR:
mtez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPT29_012220 (topA)
DNA replication proteins [BR:
mtez03032
]
Prokaryotic type
DNA Topoisomerases
HPT29_012220 (topA)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPT29_012220 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UVF21818
LinkDB
All DBs
Position
complement(2574485..2577178)
Genome browser
AA seq
897 aa
AA seq
DB search
MKVLVVESPAKAKTINKYLGKDYEVLASFGHIRDLPAKDGSVDPDADFRMIWTLEDRGSK
RVSDIAKAIKGAEKLILATDPDREGEAISWHVLEALREKRVLKDLPVERVTFNAITKDAV
QAALRQPREIDQALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIETFKPREYWSLIATLATKDGGVFDARLVGADGKKIQRLDIGNGKDAEAFKKDLELA
TFSVANIEAKPAKRHPYPPFTTSTLQQEASRKLGLAPAQTMRIAQRLYEGVDIGGETVGL
ITYMRTDGVDMAPEAVQAARRVIGKEYGDRYVPSVPRKYTTKAKNAQEAHEAIRPTDMGR
LPKAVAKYLEPEQARLYDLIWTRTVASQMESAELERTTAEIAARVGPRKLDLRATGQVIK
FDGFLTLYNESKDDEGDEDEGRLPPMTAGDPLERRRINASQHFTEPPPRYSEASLVKRME
ELGIGRPSTYAAVLQTLRDREYVRIEKKRLVPEDKGRIVTAFLESFFRRYVEYDFTADLE
EQLDRISNSEIDWKQVLRDFWRDFSAAIGGTKELRTTEVLDALNELLGPHIFPDKGDGSN
PRTCPTCGTGQLSLKLGKFGAFIGCSNYPECKYTRQLAANGVEGEGDGSSENGGQPGVKV
LGTDPETGLEVTLRDGRFGPFVQLGEGEKPKRSSLPKGLSPALVELEKALKLLALPRQVA
THPESGEPILASIGRYGPYVQHGKIYANLGPSDDVLEIGANRAIDLIVTKESGGGGARRG
AADPGRALGDDPESGKPIVVKAGRFGPYVTDGETNATLPRTMAQEAVTLDEAVELLKARR
AAGPSKKAARGRKAPAKKVAAKAPAAKKAAPKTAAKKAAAKKPVAKKAPAKKTAKAG
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctcgtcgtcgagtcgcctgcgaaggccaagacgatcaacaaatatctcggc
aaggattacgaggtcctggcctccttcgggcatatccgcgatctgcccgccaaggatggc
tcggtcgacccggatgccgattttcgcatgatctggacgctcgaggaccggggctcgaag
cgggtctccgatattgccaaggcgatcaagggcgccgagaagctcatcctggccaccgac
ccggatcgcgagggcgaggcgatatcctggcacgtcctggaagctctgcgcgagaagcgc
gtcctcaaggacctgcccgtcgagcgggtgaccttcaacgccatcaccaaggacgccgtt
caggccgccctgcgtcagccgcgggagatcgaccaggcgctcgtcgacgcctatctggcc
cgccgggcgctggactacctcgtgggcttcaccctctcgccggttctctggcgcaagctg
ccgggcgcccgctcggccggccgcgtccagtcggtggctctgcgcctggtctgcgaccgg
gaactcgagatcgagaccttcaagcccagggaatactggtcgttgatcgccacgctcgcc
acgaaagacggcggggtgttcgacgcgcggctcgtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaacggcaaggacgcggaagccttcaagaaggacctagagctggcg
accttctcggtggccaacatcgaggccaagccggccaagcgccatccttatccgcccttc
accacctcgaccctgcagcaggaggcctcgcgcaagctcggcctcgccccggcccagacc
atgcgcatcgcgcagcgtctctacgagggcgtcgatatcggcggtgagacggtcggcctc
atcacctatatgcgaacggatggcgtcgacatggcgccggaggccgtgcaggccgcccgc
cgggtgatcggcaaggagtacggcgaccgctacgtgccatccgtgccccgcaagtacacg
accaaggccaagaacgcccaggaggcccacgaggccatcaggccgacggacatgggccgt
ctgccgaaggccgtggccaagtatctggagccggagcaggcccgcctctacgatctgatc
tggacccgcaccgtggcgagccagatggaatcggccgaactcgagcggaccacggccgag
atcgccgcccgggtcggtccgcgcaagctcgaccttcgcgccaccggccaagtgatcaag
ttcgacggcttcctcaccctctacaatgagagcaaggacgacgaaggcgacgaggacgag
ggacgtctgcccccgatgacggccggagatccgctggagcgccgccgcatcaacgcctcc
cagcacttcaccgagccgccgccccgctactcggaggcctctctcgtgaagcgcatggag
gagctcggcatcgggcgcccctcgacttacgcggccgtgctccagaccctgcgcgaccgg
gaatacgtgcgtatcgagaagaagcggctcgtgcccgaggacaagggccggatcgtcacg
gccttcctggagagcttcttccgccgctacgtggaatacgacttcacggccgaccttgag
gagcagctcgaccggatctccaattcggagatcgactggaagcaggtgctgcgcgacttc
tggcgcgacttctccgccgccatcggcggcaccaaggagctgcgcaccacggaggtgctc
gatgccctcaatgagcttctcgggccgcatatctttcccgacaagggcgacggctccaac
ccgcgcacctgcccgacctgcggcaccgggcagctctcgctgaagcttggcaagttcggc
gccttcatcggctgctcgaactatcctgagtgcaagtacacccgccagctcgccgccaac
ggcgtcgagggcgaaggcgacggctcgtcggagaatggtgggcagccgggcgtgaaagtg
ctgggcaccgatcccgagaccgggcttgaagttaccttgcgcgatggccgattcggcccg
ttcgtgcagctcggcgaaggcgagaagcccaagcgctcgtccctgccaaaggggctgtct
ccggctctggtcgagctggaaaaggccttgaagctcctggcgttgccgcgccaggtggcg
acacatccagaatcgggcgaaccgatcctggcgagcatcggccgatacggaccctacgtt
cagcacggcaagatctatgccaatctcgggcccagcgacgatgtgctggagatcggggcc
aaccgggcgatcgacctgatcgtcacgaaggagagcggtggcggaggcgcccgccgcggc
gcggccgatccgggccgtgcgctgggcgacgatccggaatccggcaagccgatcgtcgtg
aaggcaggccggttcggcccctacgttaccgacggcgagaccaacgccaccctgccgcgg
acgatggcccaggaggcggtgacgctggacgaggcggtcgagcttctgaaggcgcgtcgc
gccgccggcccgtcgaagaaggcggcccgcggtcgcaaggctcctgccaagaaggtggcc
gccaaggcacctgccgcgaagaaagccgctcccaagacggcggcaaaaaaggcggccgcc
aagaagccggtggccaagaaggcgccagccaagaagaccgccaaggcaggctga
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