Microvirga terrae: HPT29_012770
Help
Entry
HPT29_012770 CDS
T09145
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mtez
Microvirga terrae
Pathway
mtez03030
DNA replication
mtez03430
Mismatch repair
mtez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPT29_012770 (dnaE)
03430 Mismatch repair
HPT29_012770 (dnaE)
03440 Homologous recombination
HPT29_012770 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtez03032
]
HPT29_012770 (dnaE)
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_012770 (dnaE)
Enzymes [BR:
mtez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPT29_012770 (dnaE)
DNA replication proteins [BR:
mtez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPT29_012770 (dnaE)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPT29_012770 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UVF17427
LinkDB
All DBs
Position
2691783..2695256
Genome browser
AA seq
1157 aa
AA seq
DB search
MARILHDIGFVHLHVHSSYSLLEGALKVAQLAKLAAADKQPALALTDTNNLFGALEFSEK
LAGSGIQPIAGVQLSVCFEEPDPVARVVPQPSNIVLLAQTEEGYRNLMRLVSHAYFGVPL
GEDPRVMAPALSAHSEGLIALTGGFSGPLDCALRNGGRQDFAQARLDMLKGAFGHQLYVE
IQRHGLDDERVIENELLALADRNGLPIVAANEPFFSSAKDYEAHDALLAIAEGQIVSNPN
RRRLSPEHHFKTRQQMMELFADLPDALQASVEIAMRCATRVRTRKPILPNFGTGPDAAAL
DEGEELKRQAEEGLEKRLAAHGPAPGLTEQDYRDRLAYEIGIIRNMKFPGYFLIVSDFIK
WAKDHNIPVGPGRGSGAGSLVAYALTITDLDPLRFALLFERFLNPERVSMPDFDIDFCVE
GRERVIEYVQQRYGEEQVAQIITFGTLLARGVMRDVGRVLEMPYGQVDKLTKLVPQNPAN
PVTLAQAIEGEPKLQAAIDEEPVVKRMLDIAQKLEGLHRHASTHAAGVVIGDRPLQELVP
LYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTVLRTAVDLIRRKGVEVDLSALPLD
DRKTYEMLQRGETVGVFQVESAGMRKALVEMETDRFEDIIALVALYRPGPMANIPVYCAR
KLGKDEHNKRDWYPHDKLEPILHETFGIIVYQEQVMEVAKVLSGYSLGDADLLRRAMGKK
IKAEMDAQRERFVSGAKEGGLDKAKANEIFDLLAKFADYGFNKSHAAAYALVAFQTAYLK
ANYAVEFLAASMTLDLDNTDKLAEFRREAQRLGFKVIPPSINRSGVVFDVTYDEQGRGQI
LYALAAVKGVGRQAIESVVEARGNKPFKDLADFARRINPRMINKRTLENLIAAGAFDELE
PDRAKACASIDAMMSLAQQSHEAANGGMMDMFGGVASADVQLRIGPYEPWPAAERLQREY
DAVGFFLSGHPLDEYGDLLKKLRVQTWVEFCRSVKAGNSVGRVAATVLDRQERRTKTGNK
MGILVLSDQTGQFEAIIFSEGLQRLRDVLEPGSAVVLMLQAGLEGEEVRARIGMAEPLDE
AVAKHQKSMRIFLRDERPIPSVFERLKVRGEGEVSLVLILDDGDREVEVKLPGKYMASPQ
VAGALRAVPGVVDVHMN
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcattcttcacgatatcggtttcgtccatctgcatgtccattcctcatactcc
ctgctcgagggggcgctgaaggtcgcgcaactcgctaaactcgccgccgccgacaagcag
ccggcgctcgcgctcaccgacaccaacaatctcttcggggccctcgagttctccgagaag
ctcgcaggctccgggatccagccgatcgcaggcgtacagctctccgtctgcttcgaggag
ccggatcccgtcgcccgcgtggtgccgcagccatccaacattgtgctgcttgcgcagacg
gaggagggatatcgcaacctcatgcgtctcgtgagccacgcctatttcggcgtgccgctg
ggtgaggacccgcgggtgatggcgcccgcgctctcggcgcatagcgagggattgatcgcc
ctgacgggcggattctcgggcccgctcgattgcgcgctgcgcaacgggggccgccaagac
ttcgcgcaggcgcgtctcgacatgctgaaaggcgcattcggtcatcagctgtatgtcgag
atccagcgtcatgggctggacgacgagcgtgtaatcgagaacgagctgctggcgttggcg
gaccggaatggcctgcccatcgtcgcggcgaacgagcccttcttctcgtccgcgaaggac
tacgaggcgcacgatgcgctgctcgccattgcggaagggcagatcgtctcgaaccccaat
cggcgccgcctctccccagagcatcacttcaagacccgccagcagatgatggagctgttc
gcggatctgccggatgcgctccaggcgagcgtcgagatcgccatgcgatgcgccacgcgg
gtgcggacacgcaagcccatcctgccgaatttcggcaccggcccagacgccgccgccctc
gacgaaggcgaggaactcaagcgacaggccgaggagggactcgagaagcgcctcgcggcg
catggacctgcgccgggtctgaccgagcaggattaccgggaccggcttgcctacgagatc
ggcatcatccggaacatgaagttcccggggtacttcctgatcgtgtccgacttcatcaaa
tgggcgaaggatcataacattcccgtcggaccgggccgtggttcgggtgcaggctccctc
gtggcctacgcgctcaccatcaccgatctcgatcccctgcggtttgcgctgctgttcgag
cgcttcctcaacccggagcgcgtctcgatgccggacttcgacatcgatttctgcgtggaa
gggcgcgagcgcgtcatcgaatatgtgcagcagcgctacggtgaggagcaggtcgcgcag
atcatcacgttcggtacgctgctcgcccgcggcgtgatgcgcgacgtcggccgcgtgctt
gaaatgccctatggtcaggtggacaagctcacgaagctggtgccgcagaacccggccaat
ccggtcactctcgcgcaagcgatcgagggcgagccgaagcttcaggccgccatcgacgag
gagcccgtcgtcaagcgcatgctcgacatcgcgcaaaaactcgaaggcctccaccgtcac
gcctcgacccatgccgccggcgtggtgatcggcgaccgtccgctgcaggaattggttcca
ctgtaccgagacccgaagaccggcatgcgggtgacccagttcaacatgaaatgggtcgag
caagcaggcctcgtgaagttcgatttcctcgggctcaagaccctcaccgtgctgcgcacc
gctgtcgatctcattcgacgaaagggagtcgaagtcgacctctcggccctgccgctggat
gaccgcaagacctacgagatgcttcagcgcggtgagacggtcggggtgttccaggtggaa
tcggcgggcatgcgcaaggccctcgtcgagatggagaccgaccgcttcgaggacatcatc
gccctcgtggcgctctatcgcccgggcccgatggcgaacatcccggtctactgcgcgcgc
aaactcggcaaggacgagcacaacaaaagggactggtatccgcacgacaagctggagccg
atcctgcatgagaccttcggcatcatcgtctatcaggagcaggtgatggaggtggcgaaa
gtcctctccggttactcgctcggcgacgccgatcttctgcgccgcgccatgggtaagaag
atcaaggcggaaatggacgcgcagcgcgagcgcttcgtgtccggcgcgaaggagggtggg
ctcgacaaggccaaggccaacgagatcttcgacctgctcgccaagttcgcggattacggc
ttcaacaagagccacgccgccgcctatgctctcgtggcgttccagacggcctatctcaaa
gccaattatgcggtcgagttcctggccgcgtccatgacgctcgatctcgacaataccgac
aagctggctgaattccgccgcgaagcccagcgcctcggattcaaggtcattccgccgtcg
atcaatcgttcgggcgtcgtcttcgacgtgacttatgacgagcagggcaggggccagatt
ctgtatgctcttgctgccgtcaaaggcgtcggacgccaagccatcgagagcgtcgtcgag
gcgcgagggaacaagccgttcaaggacctggccgacttcgcccggcgcatcaacccgcgc
atgatcaacaagcgcacgctcgagaacctgatcgcagccggcgccttcgacgaactggag
cccgaccgggcgaaggcctgcgcatcgatcgatgccatgatgagcctcgcccagcaatcc
cacgaggcggccaacggcggcatgatggacatgttcggcggcgttgcgtcggcggatgtg
cagttgcgtatcggaccctacgagccgtggcccgccgccgagaggctgcagcgggaatac
gacgccgtcggattctttctctcaggccatcctctcgacgagtacggcgacctcctcaag
aagctgcgtgtgcagacctgggtcgagttctgccgctcggtcaaggcaggcaactccgtg
ggccgggtcgcggccaccgttctcgacaggcaggagcgccgcacaaagaccggcaacaaa
atgggcatcctcgtgctgtcggatcagaccgggcaattcgaagccatcatcttttccgaa
ggcctgcaacgtctccgcgacgtgcttgaaccgggctccgccgtggttctgatgcttcag
gccggcctcgaaggcgaagaggtgagggcgcggatcggcatggccgagccgttggatgaa
gccgttgccaaacaccagaagagcatgcgcatcttcctgcgcgacgaacgtcctattccg
agcgtcttcgagcggctcaaggttcggggcgaaggggaggtttccctcgtgctcatcctc
gatgatggagatcgggaggtcgaggtcaagctccccggcaagtacatggccagcccccag
gtcgctggggcgctcagggcggtcccgggcgtggtggacgtgcacatgaactga
DBGET
integrated database retrieval system
