Microvirga terrae: HPT29_013840
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Entry
HPT29_013840 CDS
T09145
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtez03009
]
HPT29_013840 (rimO)
Enzymes [BR:
mtez01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPT29_013840 (rimO)
Ribosome biogenesis [BR:
mtez03009
]
Prokaryotic type
ribosomal protein modification factors
HPT29_013840 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
PUA
Motif
Other DBs
NCBI-ProteinID:
UVF17625
LinkDB
All DBs
Position
2938770..2940086
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AA seq
438 aa
AA seq
DB search
MNAPAPKVSFVSLGCPKALVDSERIITQLRAQGYQLTKEHDGADVVIVNTCGFLDSAKAE
SLEAIGDAMAENGKVIVTGCMGAEPEQIRDQFPNVLAITGPQAYESVVSAVHQAVPPAHD
PFVDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPIADVLREAEKLAR
AGVKELLVISQDTSAYGLDIKYQPSLWKDREVRTRFFELARELGELGMWVRMHYVYPYPH
VDEVIPLMAEGKILPYLDIPFQHASPRVLKSMRRPGNQEKTLERIHKWRDICPDLAIRST
FIVGFPGETEEDVDFLMQWLKDAKIDRAGCFQYEPVQGAPANDIDGAVPPEVKEERWHRF
MQTQQKVSAKILKSKVGRTLPVIIDEQGSTVATGRTQYDAPEIDGAVYVASKTPLKPGEI
VNVRIEASDEYDLHGTAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcccgcgccgaaagtctcgttcgtttccctaggctgcccgaaggccctggtc
gattccgaacgcatcatcacccagctccgggctcagggctaccagctcaccaaggagcac
gacggggccgacgtggtgattgtcaacacctgcgggttcctcgacagcgccaaggccgag
tcgctggaggcgatcggcgacgccatggcggagaacggcaaggtcatcgtgaccggctgc
atgggcgccgagccggagcagatccgcgaccagttcccgaacgtcctggcgatcaccggg
ccgcaggcctacgaatccgtcgtctcggcggtgcaccaggcggtgccgccggcgcatgac
cccttcgtcgacctcgtgccgccccagggcgtcaagctgaccccgcgccactacgcctac
ctgaagatctcggagggctgcaacaaccgctgctccttctgcatcatccccaaactgcgc
ggcgacctcgtcagccgcccgatcgccgacgtgctgcgcgaggcggaaaagctggcccgg
gccggggtcaaggaactcctggtgatctcgcaggacaccagcgcctacggactcgacatc
aagtaccagccgagcctgtggaaggaccgggaggtccgcacgcggttcttcgagctcgcc
agggagctgggcgaactcggcatgtgggtgcgcatgcactacgtctacccctacccgcac
gtggacgaggtcatcccgctgatggccgagggcaagatccttccctatctcgacatcccg
ttccagcacgcctccccgcgggtcctgaaatccatgcgccgcccgggcaaccaggagaag
accctggagcgaatccacaagtggcgcgacatctgccccgacctcgccatccggtcgacc
ttcatcgtcggcttcccgggcgaaaccgaggaggacgtggacttcctgatgcagtggctg
aaggacgccaagatcgaccgggccggctgcttccagtacgagccggtccagggcgcgccc
gccaacgacatcgacggcgccgtgccgccggaggtgaaggaggagcgctggcaccgcttc
atgcagacccagcagaaggtcagcgccaagatcctgaagtcgaaggtcggcaggaccctg
ccggtcatcatcgacgagcagggctccacggtggcgaccggccgcacccagtacgacgcc
cccgaaatcgacggcgccgtctacgtggcgtccaagaccccgctcaagccgggcgagatc
gtcaacgtgcggatcgaggcttccgacgagtacgatctgcacgggacggcggtctga
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