Microvirga terrae: HPT29_014240
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Entry
HPT29_014240 CDS
T09145
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mtez
Microvirga terrae
Pathway
mtez03410
Base excision repair
mtez03430
Mismatch repair
mtez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPT29_014240 (recJ)
03430 Mismatch repair
HPT29_014240 (recJ)
03440 Homologous recombination
HPT29_014240 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_014240 (recJ)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPT29_014240 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPT29_014240 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPT29_014240 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Peripla_BP_6
LisH_2
Motif
Other DBs
NCBI-ProteinID:
UVF17699
LinkDB
All DBs
Position
complement(3026963..3028774)
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AA seq
603 aa
AA seq
DB search
MTESSPLVLPKAFLGVTNSALGRTWVERCDAAQGTIALAIAQTHGLPDVLSRVLAGRGVG
LHDTDGFLNPRLRDLMPDPHRLTDMEAAASRLADAVLRNEKVAIFGDYDVDGACSAALLA
EYLRACGLDYAIHIPDRITEGYGPNVDAIRALKQQGADILVTVDCGTASIEPLAEARRLG
LDPIVLDHHQAPEQLPDALAIVNPNRQDDLSGLGHLCAAGVVFLSLVALNRILRLRGFFQ
GRPEPDLMGSLDLVALATVADVVPLIGLNRAFVRQGLAIMRSRRRVGLAALLDTAGLAGT
PESWHLGYLVGPRINAGGRIGDAALGSRLLLTEDPMQAGRLASELDRLNRERQAIEVVAV
AEAEAQALMALERMPDLPVLVTASAEWHPGVVGLISARTKERFRRPAFAFTLNPDGTATG
SGRSVPGVDLGHAVRAAVDAGLAIKGGGHTMAAGVTIQAVDLERFLAFVTERLTEPVSTM
RLRDDFAIDATLTAGGAQPAVVTALERAGPFGQGQPEPVFAFPQHRLVEAREVGSGGHMR
VKLRGGDGSVIGGIAFRAAGQPLGIALSQAIGNTLHVAGTLSIDRWGGNEKVEVRIMDAA
RPE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatcatccccacttgtcctgccgaaagccttcctcggcgtcaccaattcggcc
ctcgggcgcacctgggtggagcgttgcgacgccgcccagggaacgatcgcgctcgccatc
gcccagacccatggcctgccggatgtgctgtcgcgggttctggccgggcgtggcgtcggg
ctgcatgataccgacggcttcctgaaccctcgcctgcgggatctgatgcccgacccccac
aggctgaccgacatggaggctgcggcctcccggttggccgatgcggttctgcgcaacgag
aaggtggcgatcttcggcgactacgatgtggacggcgcttgcagcgcggcgctcctcgcc
gagtatctgcgcgcctgcggcctggattacgcgatccacattcccgaccggatcaccgaa
ggctatgggcccaatgtcgacgccatccgggcgctgaagcagcagggcgccgacatcctc
gtcacggtcgattgcggcacggccagcatcgagcctctggcggaggcccgccgcctcggc
ctcgatcccatcgttctcgaccaccaccaggcacccgagcagctgccggacgcgctcgcc
atcgtgaacccgaaccggcaggacgatctctccggcctcggccatctctgcgcggccggc
gtcgtgttcctgtcgctcgtcgccctcaaccggattctgcgtctgcgcgggttcttccag
gggcgtccggagcccgacctgatggggagcctcgatctcgtggcgctggcaaccgtggcc
gacgtggtgccgctcatcggcctcaaccgggccttcgtgcgccaggggctcgccatcatg
aggagccgccgccgggtcggtcttgcggcgcttctcgatacggccggtctcgcggggacg
cccgagagctggcatctcggctatctggtcgggccgcggatcaatgccggcggacgcatc
ggcgacgcggccctgggctcgcggcttctgctgacggaggatcccatgcaggccggacgg
ctcgcctccgagctcgaccggctgaatcgggagcgccaggccatcgaggtcgtggcggtc
gccgaagccgaggcccaggccctgatggcgctcgagcgcatgccggacctgccggtgctc
gtcaccgcctcggccgaatggcacccgggcgtggtcggcctgatctccgcccggaccaag
gagcggtttcgccgccccgccttcgccttcaccctcaacccggacggcacggcgaccggg
tcgggccgttccgtgccgggcgtcgacctcggacatgcggtgcgtgcggccgtggatgcg
gggctcgcgatcaagggcggcggccacaccatggcggccggcgtgacgatccaggcggtc
gatctcgagcgcttcctcgccttcgtcaccgaaaggctcaccgagccggtgagcaccatg
cgcctccgggacgatttcgccatcgacgcgacgctcacggcagggggcgcgcagccggcg
gtcgtgaccgccctggaacgcgcagggccgttcggccagggccagccggaaccggtcttc
gcgttccctcagcatcggctggtcgaggcgcgggaggtcggcagcggcgggcatatgcgc
gtcaagcttcgtggcggcgacggcagcgtcatcgggggaatcgccttccgggccgccggg
cagccgctcggcatcgccctgtcgcaggccatcggcaacacactccatgtggccgggact
ctctcgatcgatcgctggggtggaaacgagaaggtcgaggtccggatcatggatgcggca
cgaccggaataa
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