Microvirga terrae: HPT29_015055
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Entry
HPT29_015055 CDS
T09145
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mtez
Microvirga terrae
Pathway
mtez03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPT29_015055 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_015055 (uvrA)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPT29_015055 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPT29_015055 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
AAA_25
BCA_ABC_TP_C
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UVF17840
LinkDB
All DBs
Position
3199416..3202397
Genome browser
AA seq
993 aa
AA seq
DB search
MAKLDDLFNRAKAGDPDARVISVRGAREHNLKNVDLMVPRDRFVVFTGLSGSGKSSLAFD
TIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTE
IYDYMRLLWARVGIPYSPATGLPIESQTVSQMVDRVLDLPEKTRLYLLAPVVRGRKGEYR
KEIAEFQKKGFQRLKIDGEYYAIDEAPALDKKFKHDIDVVVDRIVVRADIAARLSESFET
ALELTDGIAVIEYADDKDEKGQPKRIVFSSKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CSGIGHEMRIDEALVVDETLSLKRGAILPWAKSTSPYYGQTLEAITKHFKASMTKPWTEL
PEKVRDVILYGSNGETIRMAYDDGLRAYEVRKPFEGVIPNLERRYKETESDWAREEIGRF
MGETPCEACGGKRLKPEALAVKIAGSDIGDATALSVKDAHLWFSDLSKKLTKKQNEIAGR
ILKEIRERLTFLVDVGLEYLTLARSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNERLLVTLKRLRDLGNTVIVVEHDEDAILHADYVFDIGPGAGIHGGEIVAEGTPD
EIMSNRKSLTGKYLTGEMSVKVPGKRRKPDPKRKIKLVGAKGNNLKDVTAEIPLGTFTCI
TGVSGGGKSTLVIDTLYKAVARKLNGALEHPAPFDRIEGLEHLDKVIDIDQSPIGRTPRS
NPATYVGAFTPIREWFAGLPEAKARGYQAGRFSFNVKGGRCEACSGDGVIKIEMHFLPDV
YVTCDVCKGKRYDRETLEVKYREKSIADVLDMTVEEARELFKAVPSIREKMQTLARVGLD
YVHVGQQATTLSGGEAQRVKLSKELSKRATGRTLYILDEPTTGLHFHDVAKLLEVLHELV
DQGNTVVVIEHNLEVIKTADWVIDMGPEGGNGGGQIVAQGTPEDIAAAEASHTGRFLKEV
LERRPLKKEAPAKDAAKKAPAKKDKKVTRQAAE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggctaaactcgacgatctgttcaaccgcgcgaaggcgggagacccggatgcgcgcgtc
atctccgtccggggcgcgcgggagcacaatctcaagaacgtcgacctcatggtcccgcgg
gacaggttcgtggtcttcaccgggctgtcgggctccggcaagtcgtcgctcgccttcgac
acgatctatgccgaggggcagcgccgctacgtcgagtccctgtcggcctatgcccgccag
ttcctggagatgatgcagaagccggacgtggaccagatcgacggtctctcgcccgccatc
tccatcgagcagaagaccacctcgaagaacccgcgctcgacggtcgggaccgtcactgag
atctacgactacatgcgcctgctctgggcacgcgtcggcatcccctattcgcccgccacc
ggcctgcccatcgagagccagaccgtctcccagatggtcgaccgggtgctggacctgccg
gagaagacgaggctttaccttctggccccggtggtgcgcggccgcaagggcgagtaccgc
aaggagatcgccgagttccagaagaagggcttccagcgcctgaagatcgacggcgagtac
tacgccatcgacgaggcccctgccctcgacaagaagttcaagcacgacatcgacgtggtg
gtggaccggatcgtggtgcgggccgacatcgccgcgcgcctgtcggaatccttcgagacg
gccctcgagctcaccgacggcatcgcggtcatcgaatatgccgacgacaaggacgagaag
gggcagccgaagcgcatcgtgttctcgtccaagttcgcctgcccggtctccggtttcacg
atccccgagatcgagccgcgtctgttctcgttcaacaatcccttcggcgcctgcccgacc
tgcagcggcatcggccacgagatgcgcatcgacgaggcgctggtcgtggacgagacgctt
tcgctcaagcgcggagccatcctcccctgggcgaagtcgacctcgccctattacggccag
accctcgaggcaatcaccaagcacttcaaggcgtccatgacgaagccctggacggagctt
ccggagaaggtgcgcgacgtcatcctctacgggtcgaacggcgagaccatccgcatggcc
tatgacgacgggcttcgcgcctacgaggtgagaaagcccttcgagggcgtgatccccaat
ctcgagcgccgctacaaggaaaccgagagcgactgggcccgcgaggaaatcggccgcttc
atgggcgagacgccctgcgaggcctgcggcggcaagcgcctgaagccggaagcgctcgcg
gtgaagatcgcgggctccgatatcggcgacgccacggcgctctccgtgaaggacgcccat
ctctggttcagcgacctgtcgaagaagctcaccaagaagcagaacgagattgccggccgc
attctcaaggagatccgcgagcgcctcaccttcctggtcgatgtgggcctggaatacctg
acgctcgcccgctcctcgggcaccttgtcgggcggcgagagccagcgcatccgtctggcg
tcccagatcggctccggcctcacgggcgttctctacgtgctcgacgagccctccatcggc
ctgcaccagcgcgacaacgagcgcctgctcgtcaccctcaagcgcctgcgcgatctcggc
aacacggtaatcgtggtggagcatgacgaggatgccatcctgcacgccgactacgtgttc
gatataggccccggcgccggcatccatggtggcgagatcgtcgccgagggcacgcccgac
gagatcatgtcgaatcggaagtcgctgaccggcaagtatctcacgggcgagatgtccgtg
aaggtgccgggcaagcgccgcaagcccgatccgaagcgcaagatcaagctcgtcggcgcg
aagggcaacaacctgaaggacgtgacggcggagatcccgctcggcaccttcacgtgcatc
accggggtgtccggcggcggcaagtccaccctggtcatcgatacactctacaaggccgtg
gcgcgcaagctcaacggcgccctggagcatcccgcgccgttcgaccgcatcgagggcctg
gagcatctcgacaaggtcatcgacatcgaccagtcgcccatcggccgtacgccacgctcg
aacccggccacttacgtcggggcgttcacgccgatccgcgaatggttcgcgggcctgccc
gaggcgaaggcgcgcggctaccaggcgggccgcttctccttcaacgtcaagggcggccgc
tgcgaggcctgctcaggcgacggcgtgatcaagatcgagatgcacttcctgcccgacgtc
tacgtcacctgcgacgtatgcaagggcaagcgctacgatcgcgagaccctggaggtgaag
taccgcgagaagtccatcgccgacgtgctcgacatgaccgtcgaggaagcgcgcgagctg
ttcaaggcggttccgtcgatccgcgagaagatgcagacgctggcccgcgtcggcctcgac
tacgtgcatgtgggccagcaggcgacgaccctctccggcggcgaagcgcagcgcgtcaag
ctgtcgaaggagctctccaagcgcgccaccggacgcacgctctacatcctcgacgagccg
acgaccggtctgcacttccacgatgtggcgaagctgctcgaggtgctgcacgagctcgtc
gaccagggcaacacggtcgtggtcatcgagcacaatctcgaggtcatcaaaaccgccgac
tgggtgatcgacatgggacccgaaggcggcaacggcggcggccagatcgtcgcccagggc
acgccggaggacattgccgcagcagaggcgagccacaccggtcgcttcctcaaggaagtg
ctggagcgcaggcccttgaagaaggaagcgcctgcgaaggatgccgccaaaaaggctccg
gcgaagaaagacaagaaggtgacgcggcaggcggcggagtaa
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