Microvirga terrae: HPT29_015295
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Entry
HPT29_015295 CDS
T09145
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtez03016
]
HPT29_015295 (rnd)
Enzymes [BR:
mtez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HPT29_015295 (rnd)
Transfer RNA biogenesis [BR:
mtez03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HPT29_015295 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UVF17885
LinkDB
All DBs
Position
3251818..3252981
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AA seq
387 aa
AA seq
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MDLITSTDALAAVCNRLSQHPFVTVDTEFLRETTYYPKLCLIQMASPDPAEACLIDPLAE
GISLEPFMALMADTNVVKVFHSARQDLEIVWNLGGIVPEPLFDTQVAAMVCGYGDSVSYE
QLTNDLAKAKIDKSSRFTDWSRRPLTDAQLTYALSDVTHLVKVYEALLDQLQKNGRLEWL
AEEMAILTSPETYQADPANAWRRLAGRLRKPREIAVLMEVSAWREREAQARDVPRGRILK
DDAVIDIATSAPRSVEALGRLRTIPNGFERSRTGGEILEAVERALARDPATIPMPERSRG
RANTGSVVDLLKVLLKAVAEQEGVAPKIIATVEELEAIADSDSADVPSLHGWRRRLFGDK
AIALKNGELGLVLERGRVRLRTIAAQD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcacctccaccgacgccctggcggccgtctgcaaccgcctcagccagcat
ccgttcgtgaccgtcgatacggagttcctgcgcgagaccacctattatcccaagctctgc
ctgatccagatggcgagcccggaccctgcggaagcctgtcttatcgatccgctggccgag
ggcatcagcctggagcccttcatggcgctgatggccgacacgaacgtggtgaaggtcttc
cactcggcccggcaggatctcgagatcgtctggaatctcggcggcatcgtgcccgagccc
ctcttcgacacccaggtcgccgccatggtgtgcggatacggggactcggtctcctacgag
cagctcaccaacgatctcgccaaggccaagatcgacaagtcctcccgcttcaccgactgg
tcacgccgtcccctcacggacgcgcagctcacctatgccctgtccgacgtcacccatctg
gtgaaggtctacgaggcgctgctggaccagctgcagaagaacggccgcctcgaatggctg
gccgaggagatggcgatcctcacctcgccggagacctatcaggccgatccggccaatgcc
tggcggcgcctcgccggccggctgcgcaagccgcgcgagatcgccgtgctcatggaggtc
tcggcctggcgggagcgcgaagcgcaggcgcgggacgtgccccgcgggcgcatcctcaag
gatgacgcggtgatcgacatcgccacctcggcgccgcgcagcgtggaagccctggggcgt
ctgcgcacgattccgaacggcttcgagcgctcccggaccggcggcgagatcctggaagcg
gtcgagcgggcgctcgcccgcgatcccgcgacgatccccatgcccgagcgcagccgcggc
cgcgcgaataccggctccgtggtcgacctgctgaaggtcctgctcaaggccgtggccgag
caggagggcgtggcgcccaagatcatcgccacggtcgaggagctggaagccatcgcggac
agcgacagcgccgacgtccccagcctgcacggctggcggcgcaggctgttcggcgacaag
gccattgccctgaagaacggagagctcgggctggtgctggagcgcgggcgggtgaggctg
aggacgatcgccgcccaggactga
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