Microvirga terrae: HPT29_019915
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Entry
HPT29_019915 CDS
T09145
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mtez
Microvirga terrae
Pathway
mtez03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPT29_019915 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_019915 (xseA)
Enzymes [BR:
mtez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPT29_019915 (xseA)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPT29_019915 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
UVF18734
UniProt:
A0ABY5RPB8
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All DBs
Position
complement(4228143..4229717)
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AA seq
524 aa
AA seq
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MFAAKAPSNAPEWSVSDLAGALKRTLEDAFGHVRLRGEVSGYRGPHSSGHAYFCLKDQNA
RIDAVIWKGAFAKLRIRPEEGMEVIATGRITTFPGSSKYQIVVESLEPAGIGALMALLEE
RRRKLNAEGLFAQERKRRLPFLPRVVGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQ
GETCAAEVAAAIRGFNALEPGGPVPRPDVLIVARGGGSIEDLWGFNEEIVVRAAAESGIP
LVSAVGHETDWTLIDHAADMRAPTPTGAAEMVVPVRVELMAAVNDLSRRHVEAALRLVER
RRSDLRATARALPSPEALVSPKRQRLDLAAAKLYPALARNARGHEERLLKVARQLAHVSP
VANVARMRARLDAVGPRPHNAVCRSILLREESLKQVGRRLVVSRETLLRAERTRLAQAHE
LAQRVAERLGPALQGQIARKGDRLEAVSKLFDSLNYKSVLKRGFALVRDADGQPLNSADA
VLDGQALVLEFADGRADATGGRIGTRPKMAKPKLVVAEEQGALF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagccaaagctccctccaatgctcccgaatggtcggtctccgatctggcgggc
gccctcaagcgcaccctcgaggatgcgttcggccatgtccgcctgcggggcgaggtctcg
ggctatcgcggcccccattcctcgggtcatgcctatttctgcctgaaggaccagaacgcc
cgcatcgacgcggtgatctggaagggggccttcgccaagctcaggatccgccccgaggag
gggatggaggtcatcgcgacggggcgtatcaccaccttcccgggctcgtccaagtaccag
atcgtcgtcgagtccctggagccggccggcatcggcgccctcatggcgctgctggaggag
cggcgccgcaagctcaatgcggaagggctgttcgcccaggagcgcaagcgccggctcccc
ttcctgccgcgggtcgtcggggtcgtcacctcgccgaccggggcggtgatccgcgacatt
cttcaccgtctggaggaccggttcccgcgccgtgtcctggtctggcccgtgcgtgtgcag
ggcgagacctgcgcggccgaggtcgcggccgccatccggggcttcaacgccctcgagccg
ggcggacctgttccgcggccggacgtgctgatcgtggcccgcggcggcggctccatcgag
gacctttggggattcaacgaagagatcgtggtgcgggcggcggccgagagcggcatcccg
ctcgtctcggcggtcgggcatgaaaccgactggaccctgatcgaccatgcggccgacatg
cgggcgccgacgcccacgggcgccgccgagatggtggtgccggtgcgggtcgagctcatg
gctgccgtgaacgacctgtctcggcgccatgtggaagccgccctccgcctcgtggagcgc
cgccgttcggacctgcgcgccacggcccgcgcgcttcccagccccgaagccctggtctcg
cccaagcgccagcggctcgatcttgccgccgccaagctctatccggcgctcgcccgcaat
gctcgcggccacgaggagcggctgctcaaggtggcgcgacagcttgcccacgtctcgccg
gtggccaatgtcgcccgcatgcgcgcccggctcgatgccgtggggccgcgccctcacaac
gcggtctgccgctccatcctcctgcgcgaggagagcctgaagcaggtcggccgccgcctg
gtcgtctcccgagagacgctgctgcgcgccgagcggacgcgcctcgcccaggctcatgaa
ctcgcgcaacgggtcgccgagcgcctcggcccggcgctgcaggggcagatcgcccgcaag
ggcgacaggctggaggccgtgtccaagctcttcgacagcctgaactacaagtcggtgctc
aagcgcggcttcgctctcgtccgcgatgcggacggtcagcccctcaactcggcggatgcg
gtgctggacggccaggcgctcgtgctcgagttcgccgacggtcgggcggacgcgaccggc
ggccggatcggcacacggccgaagatggccaagcccaagctcgtggtcgcagaggagcag
ggcgccttgttctga
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