KEGG   Microvirga terrae: HPT29_021035
Entry
HPT29_021035      CDS       T09145                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mtez  Microvirga terrae
Brite
KEGG Orthology (KO) [BR:mtez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtez03400]
    HPT29_021035
Enzymes [BR:mtez01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HPT29_021035
    5.6.2.6  RNA 3'-5' helicase
     HPT29_021035
DNA repair and recombination proteins [BR:mtez03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HPT29_021035
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UVF18931
UniProt: A0ABY5RNV1
LinkDB
Position
complement(4473302..4475839)
AA seq 845 aa
MSHAPASLLPKIFRDWFRHRGWKPREHQLDLLAKAREDRSVLLVAPTGAGKTLAGFLPSL
VELAERGPGRGTAKDRRGLHTLYISPLKALATDIARNLEAPVQEMGLPIRIETRTGDTPS
HKRARQIERPPDILLTTPEQLALLLAHAEAREFFKDLRRVVLDELHSLVTSKRGDLLSLG
LARLVAIAPQATAVGLSATVREPDDLRRYLVPQRSPSPSEDEVERGQLADLVVVQGGAQP
DIRMLEIDERLPLAGHTASLSMPAIYDLIRDHKTTLVFVNTRLQAEYTFQELWKLNDDNL
AIALHHGSLDVSQRRRVEEAMAAGRLKAVVCTATLDLGIDWGDVDLVVNVGAPKGASRIM
QRIGRSNHRMDEPSEAYLVPANRFEILECRAALDAVHEAAQDTPDARTGALDVLCQHILG
MACAEPFRLDGLYEEVRSAAPYAGLTWEDFEACVAFVATGGYALRAYERFAKIVKGKDDL
WRVRDAKVAQQYRLNVGTIVESSMIKVRLGKSARSRPGTVLPRGRILGEIEEYFAETLTP
GDTFLFAGEVLRFEGISEDEALVTRAGAGTDPMIPSYEGGKFPLSTFLAARVRQILADPF
EWDRLPQQMTDWLLQQRRRSLLPGPRDLLVETFPRGNRFYMTCFPFEGRLAHQTLGMLLT
RRLERAKLKPLGFVANDYGIAVYASGDVAGRAARDPAFMDDLFSEDMLGDDLEDWLAESS
LMKRTFRQCAVIAGLIERRFPGEKKTGRQVTISTDLVYDVLRKHEPDHVLLRASRADAAT
GLLDVRRLGMMLERIRGRIIHKPLDRVSPLSVSVMLEIGRERVYSDNADEILAEAEAALL
DEALA
NT seq 2538 nt   +upstreamnt  +downstreamnt
atgtcccacgcgccggcctccctcctcccaaagatcttccgcgactggttcaggcaccga
ggctggaagccccgggagcatcagctcgaccttctcgccaaggcccgggaggaccgctcc
gtgctgctcgtggcgccgacgggggcgggcaagaccctcgcgggcttcctgccgagcctg
gtggaactggccgagcggggaccgggtcgcggcacggccaaggacaggcgcggcctccac
accctctacatctctcccctcaaggcgctggccaccgacatcgcccgcaacctcgaggcg
cccgtgcaggagatgggattgcccatccgcatcgagacgcgcaccggcgacacgccctcc
cacaagcgcgcccggcagatcgagcgtccgccggatatcctgctcaccacgccggagcag
ctggcgcttctcttggcccatgcggaggcgcgggagttcttcaaggatctgcgccgggtg
gtgctcgacgagctgcattccctcgtcacctcgaagcggggcgaccttctgtcgctcggg
ctcgcgcggcttgtcgccatcgccccgcaggcgaccgccgtggggctgtccgctacggtg
cgcgagccggacgatctcaggcgctatctggtgccgcagcgctcgccgtctccgtccgag
gacgaagtggagcgcggtcagcttgccgacctcgtcgtcgtgcagggcggcgcgcagccc
gacatccgcatgctcgaaatcgacgagcgcctgccgctcgccggccacaccgcctctctc
tccatgccggcgatctacgatctcatccgggatcacaaaaccaccctcgtcttcgtcaac
acgcggctgcaggcggaatacacgttccaggaactctggaagctcaacgacgacaacctc
gctatcgcgcttcatcacggctccctcgacgtgtcgcagcgccgtcgcgtcgaggaggcg
atggcggccggaaggctgaaggcggtggtgtgcaccgcgacgctcgatctcggcatcgac
tggggcgacgtggatctcgtggtgaacgtgggcgcgcccaaaggcgcatcccggatcatg
cagcgcatcggtcgctcgaaccaccgcatggacgagccgtcggaagcctatctcgtgccg
gcgaaccgcttcgagatcctggaatgccgcgcggcactcgacgcggtccacgaggccgcg
caggacacgccggatgcgcgcaccggcgccctcgacgtgctctgccagcacatcctcggc
atggcctgcgccgagccgttcaggctcgacggattgtacgaggaggtgcgctccgccgcg
ccctatgcgggcctgacctgggaggatttcgaggcctgcgtcgccttcgtggcgacgggc
ggctatgcgctgcgggcctatgagcgcttcgccaagatcgtgaagggcaaggacgatctg
tggcgcgtgcgcgacgcgaaggtggcgcagcaataccggctgaacgtgggcaccatcgtc
gagtccagcatgatcaaggtgcggctcggcaagtcggcgcgctcgcggcccggcaccgtg
ctgccgcgggggcgcatcctcggcgagatcgaggagtacttcgccgagacgctgacgccg
ggcgatacctttctcttcgccggcgaggtgctgcgcttcgagggcatctccgaggacgag
gcgctggtgacccgcgcgggcgccggcaccgacccgatgatcccgtcctacgagggcggc
aagttcccgctctccaccttcctggccgcgcgggtgcggcagatcctcgccgatcccttc
gagtgggaccgcctgccgcagcagatgaccgactggctcctgcagcagcgccggcgatcg
ctcctgcccgggccgcgcgacctcctggtcgagacctttccccgcggcaaccgcttctac
atgacctgctttcccttcgagggacggctcgcccaccagacgctgggcatgctgctcacc
cgccggctcgagcgggcgaagctcaagccgctgggcttcgtggccaacgattacggcatc
gcggtctatgcctcgggcgacgtcgccggccgcgccgcgcgcgatcccgccttcatggac
gacctgttctccgaggacatgctcggcgacgatctcgaggactggctcgccgaatcctcc
ctcatgaagcgcaccttccgccaatgcgcggtgatcgccggcctcatcgagcgccgcttc
ccgggggagaagaagaccggccgtcaggtcacgatctcgacagacctcgtctacgacgtg
ctgcgcaagcacgagcccgaccacgtgctcctgcgcgcctcgcgggcggatgcggcaacg
ggactcctcgacgtgaggcgtctcggcatgatgctagagcgcatccgggggcgaatcatc
cacaagccgctcgaccgggtttctcctttgagcgtgtccgtcatgctggagatcggccgc
gagcgcgtctatagcgacaacgcggacgagattctggccgaggcggaagcggcgcttctc
gacgaggctttggcgtga

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