KEGG   Microvirga terrae: HPT29_021125
Entry
HPT29_021125      CDS       T09145                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mtez  Microvirga terrae
Pathway
mtez03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mtez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HPT29_021125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtez03400]
    HPT29_021125
Enzymes [BR:mtez01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     HPT29_021125
DNA repair and recombination proteins [BR:mtez03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HPT29_021125
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 Viral_helicase1 HHH_5 AAA_22 AAA_11 TraI_hel_assoc_N AAA_16 Helicase_RecD PIF1 nSTAND3 NTPase_1 AAA_28 DNA_pol_lambd_f MeaB NACHT RsgA_GTPase SLFN-g3_helicase NPHP3_N AAA_24 SRP54 NB-ARC cobW HHH_2 AAA UPF0758_N KAP_NTPase AAA_18 ABC_tran ATPase_2 AAA_25 Mg_chelatase AAA_5 UvrD-helicase ATP_bind_1 ORC-CDC6-like CbiA UvrD_C MobB MMR_HSR1 AAA_14
Other DBs
NCBI-ProteinID: UVF18949
LinkDB
Position
complement(4492992..4495181)
AA seq 729 aa
MPKSSALPAASQDALTLTEHLVGSIERVTFHNDESGFCVLRVKARGHRKPVAVVGHAPSV
AIGEVVEASGEWLHDRNHGVQFRAAELRTTAPTTAEDLQRFLGSGLLKGVGPAVAQRLIA
SFGSRILDVIEKKPHELTRVHGIGMAKALGIGEAWAEHRALKDIAAFLNAHGIGGFLLAR
IYRAYGVGAIDIIKANPYRLALDLPGFEFSLADQVAMRLAFEPTADIRLQAGLATVLSDA
VKEGHSGLSVDEILRQASALLTVPTDRLLPVLDAQCAAGQLVADELDGPRSIFLKSLYGA
ELFIAQRLKEVAQGFHPWRGLDPAQVIAETEAATGVSYSASQREALIASCEAKVLVVTGG
PGVGKTTLIRSLTHLCAKHQLQVALCAPTGRAAKRLAESTGFSAKTVHRLLEASEGGFRR
NAKAPLDCNLLVVDEASMLDIRLMAALLRALPDEACLLLVGDVDQLPSIGPGQILSDIID
SGTVPVVHLREVFRQERESRIITVAHAINRGIVPDLSHQPDSDLYFVEADTPADAIAKMT
ILMRDRIPRKFGLDPVRDVQVLCPMNRGRLGTHMLNGELQQIFNPPGTESLHRAGWVYGP
GDKVMQVRNDYERDVYNGEVGIVREVDRDHGELTVAFDDRLVVYTLRELDELALAYAVTI
HKAQGSEYPAVIIPVASQQASMLRRKLLYTGVTRASRLVVMVGSRAALAQAVTHEDEPRL
SRLRNWLEA
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgccgaaatcctccgccctccctgcggccagtcaggacgctctcaccctcaccgaacat
ctcgtcggctccatcgagcgggtgacgttccacaacgacgagagcggcttctgcgtgctg
cgcgtcaaggcgcgagggcaccgcaagccggtcgccgtggtcggccacgcgccgtcggtc
gccatcggcgaagtggtcgaggcgagcggggagtggctgcacgatcgcaaccatggggtt
cagtttcgcgccgccgaattgaggaccacagcgccgaccacggcggaagacctgcagcgc
tttctcggatccggcctcctgaaaggggtcggcccagccgtggcgcagcggctcatcgct
tcctttggatcgcgcatcctcgacgtgatcgaaaagaagccccacgagctgacgcgcgtg
catggcatcggcatggcgaaggcgctcggcatcggcgaggcctgggccgagcatcgcgcg
ttaaaggacatcgcggccttcctgaacgcccacggcatcgggggctttctgctcgcgcgc
atctatcgcgcctatggagtcggggccatcgacatcatcaaggccaacccgtaccggctc
gccctcgatctcccgggtttcgagttctccctggccgatcaggtcgccatgcggctcgcc
ttcgagcccactgccgatatccgcctgcaggcgggactcgccaccgttctgtcggacgcc
gtgaaagagggacattccggattgtcggtcgacgaaatcctgcggcaggcgagcgctctg
ctcaccgttccgacggaccggctgttgcccgtgctcgatgcgcaatgcgcggccggccag
ctcgtcgccgacgaactcgacggaccccgtagcatctttctcaagagcctgtacggggcc
gagctcttcatcgcccagcgcctgaaggaggtcgctcaagggttccatccctggcgcgga
ctcgatcccgcgcaggtgatcgccgagaccgaggctgccacgggcgtctcctactcggcc
agtcagcgcgaggcgctgattgcctcctgcgaggccaaggtgctcgtcgtcaccggcggc
ccgggcgtgggcaagaccacgctcatccggagcctcacgcatctgtgcgcgaagcatcag
ctgcaggtcgctctttgcgctccgaccggccgggcggccaagcggctcgccgagagcacg
ggcttttccgccaagaccgtgcaccggcttctcgaagcctccgagggcgggttccgacgc
aacgccaaggcgccgctcgactgcaatctcctcgtcgtcgacgaggcgtccatgctcgat
atccggctcatggcggctctgttgcgcgccctgccggacgaggcctgcctgctcctcgtg
ggtgacgtggatcagctcccctccatcgggcccggacagatcctctccgacatcatcgac
tccgggaccgttccggtcgttcacctgcgggaagtgttccgccaggagcgcgaaagccgc
atcatcacggttgcgcacgccatcaatcgcggaatcgtgccggacctttcgcatcagccg
gactcggatctctatttcgtcgaagccgacacgcctgccgatgccatcgccaagatgacg
atcctcatgcgcgatcgcatcccgaggaaattcggcctcgatcccgtgcgcgacgtgcag
gtcctctgccccatgaatcgtgggcggctcggcacccacatgctgaacggcgaattgcag
cagatcttcaatccgccgggaacagagagcctgcaccgggccggctgggtctatggtccc
ggcgacaaggtcatgcaggtgaggaacgactacgagcgggacgtttacaacggggaggtc
ggcatcgtgcgcgaggtcgatcgggaccacggcgaactcaccgtcgccttcgacgacagg
ctcgtggtctatacgctccgggagctcgacgaactggcgcttgcctatgcggtgacgatc
cacaaggcgcaggggtccgagtatccggcggtgatcattcccgtggcgtcgcagcaggcc
tccatgctgcgacgcaagctgctttataccggagtgacacgcgccagccgcctcgtcgtc
atggtgggaagtcgggccgccctggcgcaggccgtcacccacgaggacgagccgcggctg
tccagattgcggaactggttggaggcctga

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