Microvirga terrae: HPT29_024355
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Entry
HPT29_024355 CDS
T09145
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mtez
Microvirga terrae
Pathway
mtez03030
DNA replication
mtez03410
Base excision repair
mtez03420
Nucleotide excision repair
mtez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPT29_024355 (polA)
03410 Base excision repair
HPT29_024355 (polA)
03420 Nucleotide excision repair
HPT29_024355 (polA)
03440 Homologous recombination
HPT29_024355 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtez03032
]
HPT29_024355 (polA)
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_024355 (polA)
Enzymes [BR:
mtez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPT29_024355 (polA)
DNA replication proteins [BR:
mtez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HPT29_024355 (polA)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HPT29_024355 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPT29_024355 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UVF19512
LinkDB
All DBs
Position
5199367..5202426
Genome browser
AA seq
1019 aa
AA seq
DB search
MPSSRPVQAGDHVFLVDGSSFIFRAYFQSMNQDQKYNARSSDGMPSGAVRLFVSKLLQFM
RDGAAGLRPTHLAIVLDKSEGSFRKELYEDYKGHRPDAPQDLKVQMPIMREAIRAFGLEP
VELQRYEADDLIATYTQQAKARGADVLIISSDKDLMQLVGPKVCFYDFESGSKGKPGYRP
ERNLDEAAVIEKWEGIPPEKIGDVLALMGDTSDNVPGVPGIGLKTAAQLIKEYGDLETLL
ERAPEIKQPKRRETLIANADTARLSKKLVTLDCDAPVPVPLDDLRLPEPDPKTLIGFLKA
MEFNTLTRRVAELYDADPTAIEPDPRLLPGGEAIRWERNGDGTGVTAPTDDAVPFFGKAD
APTGEVDPFAGLDLPETATLRRPVEGIGTPSQVAGKRATEASSVPIDVTAYETVTTLERL
KDWVARAHAQGHVAVDTETSDLDATRADLVGVSLALEPGQACYVPLQHRDESNLFGGGLV
QGQIPVGEALDVLRPLLEDSAVLKIGQNLKYDWVVFKRHGIEVRPYDDTMLISYVLDAGK
GSHGMDELSRRHLGHSPISFSDVAGTGRNKVTFDKVEISKATAYAAEDADVTLRLWQVLK
PRLVAERRATVYETLERPMVDTLARMEMRGIMVDRQILSRLSGDFAQTLARLEDEIHEMA
GEKFALGSPKQIGDILFGKMGLPGAKKTPSGQWATPATLLDELAQAGHELPAKILEWRQL
SKLKSTYTDTLQEHMHPETKRVHTSFSLAATTTGRLSSSDPNLQNIPIRTEAGRKIRKAF
VAPDGHKIISADYSQIELRLLAHIADIPQLQDAFAEGIDIHAATASAMFGVPLDQMTPDL
RRQAKTINFGIIYGISAFGLATRLGIGNAEASTFIKQYFERFPGIRTYIDETKRFCKDKG
YVTTLFGRVCHYPQIRSSNPSERAGVERQAINAPIQGTAADIIRRAMVRMEDVLKAERLS
ARMLLQVHDELVFEVPDDEVDASLPVISRVMTEAPFPAITLKVPLAVEARAAQNWDEAH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatcccgccccgtccaagccggcgaccacgtctttctcgtcgacggctcctcg
ttcatcttccgggcctacttccagtccatgaaccaggaccagaagtacaatgcccgctcg
tcggacggcatgccgtccggggcggtgcggctcttcgtgtccaagctcctgcagttcatg
cgcgatggggcggcgggcctgcggccgacccatctcgccatcgtgctcgacaagtccgag
ggctcgttccgcaaggagctctacgaggattacaagggccaccggcccgacgccccgcag
gatctgaaggtccagatgccgatcatgcgcgaggcgatccgcgccttcgggctcgaaccc
gtggagctgcagcgctacgaggcggacgacctgatcgccacctatacccagcaggcgaag
gcccgcggggcggacgtgctcatcatctcgtccgacaaggacctgatgcagctcgtcggc
ccgaaggtgtgcttctacgatttcgaatcgggctccaagggcaagccgggctaccggccc
gagcgcaacctggacgaggccgccgtcatcgagaaatgggagggaatcccgccggagaag
atcggcgacgtgctggccctcatgggcgacacctccgacaacgtgccgggcgtgccgggc
atcggcctcaagacggccgcccagctgatcaaggaatacggcgatctcgaaacgctcctg
gagcgggcccccgagatcaagcagcccaagcgccgcgagaccctgatcgccaacgcggat
acggcgcgcctgtcgaagaagctcgtgacgctcgattgcgacgccccggtgccggtgccc
ctcgacgacctgcgcctgcccgagcccgatccgaagacgctgatcggcttcctcaaggcc
atggagttcaacacgctgacccggcgcgtcgccgagctctacgacgccgatcccacggcg
atcgagcccgacccgcgcctcctgccgggcggcgaggcgatccgctgggagcgcaacggc
gacggcaccggcgtgacggcgcccaccgacgatgcggtgccgttcttcggcaaggccgat
gcgccgaccggcgaggtcgatcccttcgcgggcctcgacctgccggaaaccgcgaccctg
cgccggcccgtcgagggcatcggcacgccctcccaggtcgccggaaagcgcgcgacggaa
gcctcgtcggtgcccatcgacgtcacggcctacgagaccgtcaccaccctcgagcgcctg
aaggactgggtcgcccgggcccacgcgcagggccatgtggcggtcgacacggagacgagc
gatctcgatgcaacccgcgccgatctcgtcggcgtctcgctggcgctcgagccgggccag
gcctgctacgtgccgctgcagcaccgggacgaatcgaacctgttcggcggcggcctcgtc
cagggccagattcccgtcggcgaggcgctcgacgtcctgcgcccgctcctggaggattcc
gccgtcctcaagatcggccagaacctgaaatacgactgggtcgtgttcaagcgccacggg
atcgaggtgcggccctacgacgacaccatgctgatctcctacgtgctcgatgccggcaag
ggctcgcacggcatggacgagctctcgcgccgccatctcggccactcgccgatcagcttc
tcggacgtggccggcacggggcggaacaaggtgaccttcgacaaggtcgagatctccaag
gccaccgcctatgcggccgaggatgcggacgtcacgctgcgcctgtggcaggtgctcaag
ccccgcctcgtcgcggaacggcgcgccaccgtgtacgagacgctggagcgccccatggtc
gacaccctcgcccgcatggagatgcgcggcatcatggtcgaccggcagattctcagccgc
ctctcgggggatttcgcccagaccctggcgcggctcgaggacgagatccacgagatggcg
ggcgagaagttcgcgctcggctcgcccaagcagatcggcgacatcctgttcggcaagatg
ggcctgcccggcgccaagaagaccccgtccggccaatgggcgacgcccgcgacgctcctc
gacgagctcgcgcaggccggccacgagctgcccgccaagatcctcgaatggcgccagctc
tccaagctgaaatccacctatacggacaccctgcaggagcacatgcatccggagaccaag
cgggtgcacacctcgttctcgctcgccgccaccacgaccgggcgcctgtcctcgtccgat
ccgaacctgcagaacatcccgattcgcacggaggccggcagaaagatccgcaaggccttc
gtggcgccggacggccacaagatcatctcggccgattacagccagatcgagctgcggctg
ctcgcgcatatcgccgacatcccgcagctgcaggacgccttcgcggaagggatcgacatt
cacgcggcgacggcctcggccatgttcggcgtgccgctcgaccagatgacgccggacctg
cgccgccaggcgaagaccatcaatttcggcatcatctacggcatctcggccttcggcctc
gccacgcgcctcggcatcggcaacgcggaggcctcgaccttcatcaagcagtatttcgag
cgcttcccgggcatccgcacctatatcgacgagacgaagcggttctgtaaggacaagggc
tacgtgacgaccctgttcgggcgcgtctgccattatccgcagatccgctcgagcaacccg
tccgagcgcgccggcgtggagcgccaggcgatcaacgcgccgatccagggcaccgccgcc
gacatcatccgccgcgccatggtgcgcatggaggacgtcctgaaagccgagcgcctctcc
gcccgcatgctgctgcaggtgcacgacgaactggtgttcgaggtgccggacgacgaggtc
gacgcctccctgccggtgatctcccgcgtgatgacggaagccccctttccggccatcacc
ctgaaggtgcccctcgccgtggaagcccgcgcggcgcagaactgggatgaggcgcattag
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integrated database retrieval system
