Microvirga terrae: HPT29_024565
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Entry
HPT29_024565 CDS
T09145
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mtez
Microvirga terrae
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtez03400
]
HPT29_024565 (addB)
Enzymes [BR:
mtez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPT29_024565 (addB)
DNA repair and recombination proteins [BR:
mtez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HPT29_024565 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UVF19549
LinkDB
All DBs
Position
5251494..5254670
Genome browser
AA seq
1058 aa
AA seq
DB search
MHDSRTSPRVFSIPPGCAFLPTLVDALVDGRLVGPLADDPAALADITIYVPNRRATRALI
ALLAERGDGTAQLLPHIVPLGETDEAEFELTGLEGTPLQEAASLKPPIPPLERRLILTRL
VQRWSAEVDRALLQLGPEVPFMVPASPADAVNLAGDLETLMDAFTTEGIDWHALELAVDS
DYSKYFEITRHFVQIASENWPRILAERQASDPAQRRNALLDAEARRLTRERPAHPIIVAG
STGSVPATAHLMGVIARLPRGAIVLPGLDTDLDGESWSTIGGTGDDETDPVHGHPQASLR
RLLDRHLRVPRADVTVLGDVPEAARARNHLLSEALRPADTTDRWSLIAPEARVALSAGGC
EGLAIIEAMDEREEALAIAIALRETMAHPHRTAALVTPDRALAARVTAELARWGLSVEDS
AGIPLSDTPAGRLARLAAEAASDDLRPVRLLALLAHPMVRLGLARETVERAASVLEIGVL
RGPAPALGIEGMRAALATRRAESGHRTPRPRQRLTDADWELADDLLQRLGVAFATFTPAA
HGEGRLDLMSLVEHHRRAVDLLWTGPDDAPDEQDDETSNEALAALFDDLEHSDIRAEEGH
PLSGRFVDYPTFFTALAKQRSLSPSPRATHRRLKILGLLEARLLSVDRVVLGGLDEGSWP
PRTVTDAFLNRPMRSRVGLMPPERRIGQTAHDFVQALGTRDVVITRAHKRDGSPMVPSRF
LQRLKAFSGKDVWERMIKAGESYRRLARTLDTPEPAPPLPRPRPRPDPALFPRALSVTEI
ETLVRDPYSIFARHILKLDALEAIAVTPSAAERGTIIHDVLGQFAERYPKAVPAHALEDL
LALGSDAFAGIAEAYPELYAEWWPRFTRLATEFVVWEQARRPGLVDVYAERSGRLSIGLP
DGTIFSLRARADRIEHRRDGGFTIVDFKTGQPPGVKEVYAGFSPQLTLEAMMLMKGAFKG
LPMAKETPDLVYIHTTGGREPIKPREIGPSGKETRPVAEIVEEHRRRFEGMIVRYAKGEA
AYVSRPFPKYARRFSDYDHLARVKEWSLASAGGGEGSE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattcgaggacttcgccgcgcgtcttttccatccctccgggttgcgccttcctg
ccgaccctggtggatgcactggtcgacgggcgcctcgtcgggcctctcgccgacgatcct
gccgcccttgcggacatcacgatctacgttcccaaccgccgcgccacccgggcgctgatc
gcgctgctcgccgagcgcggcgacggcacggcgcagcttctgccgcacatcgtccccttg
ggcgaaacggatgaggccgagttcgagctgacgggcctcgagggcacgcccctgcaggag
gccgcgagcctcaagccgccgatcccgcccctggagcgccggctcatcctcacgcgcctc
gtgcagcgctggtcggcggaggtggaccgcgcgctgctgcagctcggccccgaggtgccc
ttcatggtgccggcctcgccggccgatgcggtgaacctcgcgggcgacctcgagaccctc
atggatgccttcaccaccgagggcattgactggcatgctctcgaactggcggtggattcc
gactattcgaagtatttcgagatcacccgccatttcgtgcagatcgccagcgagaactgg
cccaggatcctcgccgagcgccaggcaagcgatccggcgcagcggcgcaacgcgctgctc
gacgccgaggcgcggcgcctcacccgcgagcggccggcgcatcccatcatcgtggccgga
tcgacgggatcggtgccggcgaccgcgcatctgatgggcgtgatcgcgcgcctgccccgg
ggagccatcgtgctgcccggcctcgacaccgatctcgacggggagagctggtccaccatc
ggaggcaccggcgacgacgagaccgatccggtccatggacacccgcaggcgtcgctccgc
cgcctcctcgaccggcatctgcgcgttccgcgcgccgacgtcacggtcctcggcgatgtg
ccggaggctgcgagagcccgcaaccatctgctctcggaggccctgcgcccggccgacacc
accgaccgctggtcgctgatcgcccccgaggcccgtgtcgccctgagcgcgggcggctgc
gagggcctcgccatcatcgaggccatggacgagcgcgaggaagcgctcgccatcgccatc
gcgctgcgcgagaccatggcccatccgcacaggaccgccgccctcgtgacgcccgatcgc
gcgctcgcggcgcgcgtcaccgccgagctcgcccgctggggcctgagcgtggaggattcc
gccggcattccgctgtccgacacgccggcaggacggctcgcccgtctggccgcggaagcg
gcctccgacgacctgcggcccgtgcgcctcctggcgctgctcgcccatccgatggtgcgt
ctcggtctggcgcgcgagacggtcgagcgggccgcgagcgtgctcgagattggcgtgctg
cgcgggcccgccccggcgctcggcatcgagggcatgcgcgcagccctcgccacccgccgc
gccgagagcggtcatcgcacaccacgtccgcgccagcgcctcacggatgccgattgggag
ctcgccgacgacctgctacagcgcctcggcgtcgccttcgccaccttcacgcccgccgcg
cacggcgagggtcggctcgacctcatgtccctggtggagcatcaccggcgggccgtcgat
ctgctctggaccggccccgacgatgcgcccgacgagcaggacgacgaaacctcgaacgag
gcgctcgcggcgctcttcgacgatctggagcattccgacatccgcgccgaggagggccat
ccgctgagcgggcgcttcgtggattatccgaccttcttcacggcgctcgccaagcagcgc
tccttgagcccctcgccccgcgccacccatcgccgcctgaagattttaggccttctcgaa
gcgcgccttctctccgtcgaccgcgtggtgctcggcggattggacgagggctcctggccg
ccgcgcacggtgaccgatgcgtttctcaaccgtcccatgcgctcgcgcgtcggcctgatg
ccgccggagcggcgcatcggccagaccgcgcacgatttcgtgcaggcgctcggcacgcgc
gacgttgtgatcacgcgcgcacacaagcgcgacggctcgcccatggtgccctcgcgcttc
ctgcaacggctcaaggcgttcagcggcaaggacgtgtgggagcgcatgatcaaggcaggc
gagtcctaccgccgcctcgcgcggaccctcgatacgccggagcccgccccgcccctgccg
cgcccgcggcccaggcccgacccggccctgttcccgcgcgccttgagcgtcaccgagatc
gagaccctggtgcgcgacccctattcgatcttcgcgcgccacatcctcaagctcgacgcc
ctcgaggcgatcgccgtcacgccgagcgcggcggagcgcggcacgatcattcacgacgtg
ctcggtcaattcgccgagagatatccgaaggccgttcccgcgcacgcgctggaggatctg
ctcgccctcgggtcggatgcgttcgccggcatcgccgaggcctacccggagctctatgcg
gaatggtggccgcgcttcacgcggctcgccacggagttcgtggtgtgggagcaggcgcgc
cgcccgggcctcgtcgacgtctatgcggagcgctcgggccggttgtcgatcgggctgccg
gacggcacgatcttcagcctgcgcgcccgcgccgaccgcatcgagcatcgccgtgacggc
ggcttcaccatcgtcgacttcaagaccggccagccgcccggcgtgaaggaggtctatgcc
ggcttctcgccgcagctgacgctcgaggccatgatgctgatgaagggggcgttcaagggc
ctgcccatggccaaggaaacgcccgatctcgtctacatccacaccaccggcggacgcgag
ccgatcaagccgcgtgagatcggcccctcgggcaaggaaacgcgaccggttgcggagatc
gtcgaggagcatcgccgccggttcgagggcatgatcgtgcgctacgccaagggcgaggcg
gcttacgtctcgcggccgttcccgaaatatgcgcgccgcttctcggactacgaccatctg
gcacgcgtgaaggaatggtcgctggcgagcgcgggcggcggagagggatccgaatga
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