Microvirga terrae: HPT29_026395
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Entry
HPT29_026395 CDS
T09145
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtez
Microvirga terrae
Pathway
mtez04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HPT29_026395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtez03019
]
HPT29_026395
03009 Ribosome biogenesis [BR:
mtez03009
]
HPT29_026395
04131 Membrane trafficking [BR:
mtez04131
]
HPT29_026395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtez04147
]
HPT29_026395
Messenger RNA biogenesis [BR:
mtez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HPT29_026395
Ribosome biogenesis [BR:
mtez03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HPT29_026395
Membrane trafficking [BR:
mtez04131
]
SNARE
SNARE associated proteins
Others
HPT29_026395
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HPT29_026395
Exosome [BR:
mtez04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPT29_026395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_2
AAA_22
AAA_33
IstB_IS21
AAA_14
TIP49
AAA_28
DUF815
nSTAND3
RNA_helicase
ABC_tran
NPHP3_N
AAA_18
Vps4_C
Mg_chelatase
AAA_7
AAA_3
AAA_24
AAA_17
AAA_19
Zeta_toxin
AAA_30
TsaE
ATPase_2
Parvo_NS1
bpMoxR
AAA_11
PhoH
NB-ARC
Zot
Motif
Other DBs
NCBI-ProteinID:
UVF22220
UniProt:
A0ABY5RY80
LinkDB
All DBs
Position
pR24_1:382219..384483
Genome browser
AA seq
754 aa
AA seq
DB search
MPTADDGQVVRLQVANARPDDSGRGMARLSRKTLGELGVSEGHAIEIVGKRHTTAIAVAP
YPEDEGLNIVRLDGLQRVNAGVGSGDHVEVKRAEVRPAARVVLAPAQKGLRLQGSGDALK
RTFYQRPLTAGDVISTSVYSQRSADPRMPEEMRGLLNIPAYGLQEIRLVVVSTQPRGIVH
VTAETEIELRPQFEEPREARRADVTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDP
PKGVLLYGPPGTGKTRLARAVANETEAQFFHIAGPEIMGRHYGESEQRLRQVFQEAQQNA
PAIIFIDEIDSIAPKREEVTGEVERRIVAQLLTLMDGLEPRQNIVVIGATNRREAIDEAL
RRPGRFDREIVIGVPDEPGRREILGIHTRGMPLAPDVNLDEVARTTYGFVGADLAALSRE
AAMDSLRRILPGINLRDGIPSNVLESLQVTRQDFMNAMKRVQPSALREIMIQVPNVTWDD
IGGVEEARTRLREGVELPLKSPESFRRLGIRPAKGFLLFGPPGTGKTLLAKAVAREAQAN
FVATKSSDLLSKWYGESEQQVSRLFARARQVAPTVIFIDEIDSLAPVRGGGLGEPAVTER
VVNTILAEMDGLEELQGVVVMAATNRPNLIDPALLRPGRFDELIYVPVPDAQGRRHILGI
HTKDMPLGPDVDLDIIAERTARFTGADLEDLTRRAGLLALRESLQAEHVTMAQFEQALRE
TRPSVTPEMEREYEDMMRTLKQASPQRQPIGFLS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgcagatgatgggcaggtcgtgcgcctgcaggttgctaatgcaaggccggac
gactctggtcgaggtatggctcgcctaagccgcaagacgctcggtgaactcggggtgtcc
gaaggccacgccattgagatcgtcgggaagcgccatacgacggccatcgccgtggcgcct
tatccggaggacgagggcctcaacatcgtccgactcgacggtctgcagcgggtgaatgcc
ggtgtgggcagcggggatcacgtggaagtgaagcgcgccgaggtccgtcctgcagcgcgc
gtcgtgctcgccccggcccagaaggggctgcgcctgcagggctcgggcgatgccttgaag
cgcactttctaccagcgtccgctgaccgccggggatgtgatctccacgtcggtctattcg
cagcgttcggcagacccgcgcatgcccgaggagatgcgcgggcttctcaacattccggcg
tacggcctgcaggagatccgcctcgtcgtggtgtcgacccagccacgcggtatcgtgcat
gtgacggccgagaccgagatcgagctgcgcccgcaattcgaggagccgcgcgaggcccgc
cgggccgacgtgacctatgacgatatcggcggtctcggcagcacggtcgatcaggtgcgt
gagatggtggagctgcctctccgccatcccgaactcttccagcggctcgggatcgatccg
ccgaaaggcgtcctgctctacggccctcccggcaccggcaagacccggctggcccgagcg
gttgccaacgagacggaggcacagttcttccacatcgcagggcccgagatcatgggacgc
cactacggcgaatccgaacagcgtctgcggcaggtattccaggaggcgcagcagaatgcg
ccggcgatcatcttcatcgacgagatcgacagtatcgcgcccaagcgcgaggaggtgacg
ggtgaggtcgagcggcgcatcgtggcccagctgctcaccctgatggacggcctcgagccc
cgccagaacatcgtggtgatcggcgcaacgaatcggcgcgaagccatcgacgaggccctc
cgccggcccggccgcttcgaccgagagatcgtcatcggcgttccggacgagccgggccga
cgggagatcctcgggatccacacgcgcggcatgcccctggcccctgacgtcaatctcgac
gaggtcgcccgcaccacctacggcttcgtcggcgccgatctcgcggccctctcccgcgag
gcggccatggattccctgcgacgcatcctgcccggcatcaatctccgggacggcatcccg
tcaaatgtgctggagagcctgcaggtgacccggcaggatttcatgaacgccatgaagcgg
gtccagccctccgccctgcgcgagatcatgatccaggtgcccaacgtgacgtgggacgac
atcggcggtgtcgaggaggcccgtacccgtctgcgggagggcgtggaactgccgctcaag
agcccggaatccttccggcgcctgggcatccgcccggccaagggattcctgctgttcggg
cctcccggcaccggcaagacgctcctggcgaaagcggtcgcccgcgaggcccaggcgaat
ttcgtggcgacgaaatcgtccgatctcctgtcgaaatggtacggcgaatccgagcagcag
gtctcccgcttgttcgcccgcgcccggcaggtcgccccgacggtgatcttcatcgacgag
atcgattccctcgccccggtgcgcggcggcggcctcggcgaacctgcggtcacggagcgg
gtggtgaacacgatcctggccgagatggacggcctggaggaactgcagggcgtcgtcgtc
atggcggccacgaacaggccgaacctgatcgaccctgccctgctccggccgggacgcttc
gacgagctgatctacgtgccggttcccgacgctcagggccgccggcacatcctcgggatc
cacaccaaggacatgcccctcggccccgatgtggacctcgacatcatcgccgagcggacc
gcccggttcaccggcgccgatctcgaggatctcacccgccgggccggtctcctcgccctc
agggaatcgcttcaggccgagcacgtgaccatggcgcagttcgagcaggctctgcgcgaa
acccgcccctccgtcacgcccgagatggagcgggaatatgaggacatgatgcggaccctc
aagcaggcaagtccccagcgtcagcccatcggcttcctatcctag
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