Microvirga terrae: HPT29_027985
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Entry
HPT29_027985 CDS
T09145
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtez
Microvirga terrae
Pathway
mtez04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HPT29_027985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtez03019
]
HPT29_027985
03009 Ribosome biogenesis [BR:
mtez03009
]
HPT29_027985
04131 Membrane trafficking [BR:
mtez04131
]
HPT29_027985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtez04147
]
HPT29_027985
Messenger RNA biogenesis [BR:
mtez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
HPT29_027985
Ribosome biogenesis [BR:
mtez03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
HPT29_027985
Membrane trafficking [BR:
mtez04131
]
SNARE
SNARE associated proteins
Others
HPT29_027985
Autophagy
Aggrephagy
Other aggrephagy associated proteins
HPT29_027985
Exosome [BR:
mtez04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPT29_027985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
CDC48_2
AAA_33
IstB_IS21
AAA_14
TIP49
AAA_28
DUF815
nSTAND3
RNA_helicase
ABC_tran
NPHP3_N
AAA_18
AAA_7
Mg_chelatase
AAA_25
AAA_3
AAA_17
AAA_24
Vps4_C
AAA_19
AAA_30
Zeta_toxin
ATPase_2
TsaE
Parvo_NS1
bpMoxR
PhoH
AAA_11
NB-ARC
Zot
Motif
Other DBs
NCBI-ProteinID:
UVF22655
LinkDB
All DBs
Position
pR24_2:159698..161974
Genome browser
AA seq
758 aa
AA seq
DB search
MAETGQAVRLQVANAPLGDAGRGIARMSHQALTAMALQEGEAIEVIGKRHTTALVVGPYP
DDEGLDILRLDGLQRVNAGVGSGDYVEVKRAEVRPATRVVLAPAQKGFRLQGCGDALKRT
FHQRPLTAGDVISTSVCTPGTAGSRLPDELSGMLNIPAFGLQEIRLVVVSTEPRGIVQVT
AKTEVDLRPQFEEPKEARRADVTYDDIGGLGSTVDQVREMVELPLRHPELFQRLGIDPPK
GVLLYGPPGTGKTRLARAVANETEAQFYHIAGPEIMGRHYGESEQRLRQVFQEAQQNSPA
IIFIDEIDSIAPKREEVTGEVERRVVAQLLTLMDGLEPRQNIVVIGATNRREAIDEALRR
PGRFDREIVIGVPDEPGRREILAIHMRGMPLAEDVNLDEVARTSYGFVGADLAALSREAA
MDSLRRILPGINLRDGMPTNVLESLQVTRQDFLNAMKRVQPSALREIMIQVPNITWDDIG
GVEEARTRLREGVELPLKNPESFQRLGIRPAKGFLLFGPPGTGKTLLAKAVAREAQANFV
ATKSSDLLSKWYGESEQQVSRLFARARQVAPTVIFIDEIDSLAPLRGGGLGEPAVTERVV
NTILAEMDGLEELQSVVLMAATNRPNLIDPALLRPGRFDELIYVPVPDAAGRRHILGIHT
RTMPLGPDVNLDEIAERTSRFTGADLEDLTRRAGLLALRETLEAQTITMAHFEHALREAR
PSVTPEMEREYEDMVGTLKQQGPQRQAIGFLPLGQASS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcagagactgggcaggcggtacgtctccaggtcgcgaatgctccccttggcgatgca
ggacgcggcatagctcggatgagccatcaggcactcacagcgatggctcttcaggaggga
gaggccatcgaggtcatcggcaaacgccacacgacggctctggtggtcggtccctatccg
gatgacgaagggctcgacatcctccgcctcgatggtctgcagcgtgtcaatgccggcgtc
ggtagcggcgattatgttgaggtcaaaagggccgaagttcgcccggcaacgcgggtcgtg
ctcgctcccgcccagaagggtttccgtctgcagggttgcggcgacgccctgaagcgcacc
ttccaccagcgcccgctcacagccggtgacgtgatctccacctccgtctgcactcccggc
accgccggctctcgcctgcctgacgagctgagcgggatgttgaatattccggccttcggc
ctgcaggagatccgtctcgtggtcgtctcgaccgagccccgcggcatcgttcaggtcacg
gccaagacggaagtggatcttcgcccgcagttcgaggagccgaaagaggcaagacgcgcg
gacgtgacctatgacgacatcggcggcctcggcagcacggtcgatcaggtgcgcgagatg
gtggaactgccgctgcgccatcccgagcttttccagcggctcggcatcgacccgccaaag
ggcgtgctgctctacggccccccgggcaccggcaagacccgtctggcacgggccgtcgcc
aacgagacggaagcacaattctaccacatcgcaggccccgagatcatgggccgtcactat
ggcgagtctgagcagcggctgaggcaggtgttccaggaggcgcagcagaactcgcccgcc
atcatcttcatcgacgagatcgacagcatcgcgcccaagcgcgaggaggtgaccggcgag
gtcgagcggcgcgtcgtggcgcagctcctcaccctcatggatgggctagagccgcgccag
aacatcgtggtgatcggcgccactaaccggcgtgaagccatcgacgaggctttgcgtcgt
ccgggccgcttcgaccgggagatcgtgatcggcgttccggatgagcccggtcggcgcgag
atcctagcgatccacatgcggggcatgcccttggccgaggacgtgaacctcgacgaggtc
gctcggacatcctatggctttgtcggtgcggatctcgcggctctctcccgcgaggcggcc
atggactccctgcggcggatcctgccgggcatcaacctcagggacggcatgccgacgaac
gtgcttgagagcctgcaggtcacacggcaggacttcctcaacgccatgaagcgggtccag
ccctcggccctgcgcgagatcatgatccaggtgcccaacatcacgtgggacgacatcggc
ggtgtggaggaggctaggacccgcctgcgcgaaggcgtggagcttccgctcaagaacccg
gagtcgttccagcgcctcggcattcggcccgccaagggcttcctgctctttggccctccc
ggtaccggtaagacgctactggcgaaggctgtcgcccgcgaggctcaggcgaactttgtg
gcgacgaagtcctcggaccttctctccaaatggtatggcgagtccgagcagcaggtctcg
cggcttttcgcccgggcacgacaggttgccccgacggtgatctttatcgacgagatcgac
tcccttgccccgctccgcggcggcgggcttggcgagcccgcggtgaccgagcgcgtggtc
aacacgatcctggcggagatggacggcctggaggagttgcagagcgtcgtcctgatggcg
gcgacgaacaggccgaacctgatcgatcctgccctcctgcgcccaggccgcttcgatgag
ttgatctacgtaccggtgcccgatgccgcgggccggcggcacatcctcggcattcacact
cggaccatgccgcttggccctgacgtaaatcttgatgaaattgccgaacggaccagccgc
ttcaccggagccgatctcgaggatctcacacgccgagccggtctactggccttgcgtgaa
accctcgaggcgcagaccatcacgatggctcatttcgagcatgccctgcgggaggcacgg
ccctcggtcacgccggaaatggagcgcgaatacgaagacatggtgggcaccctgaagcag
caaggaccgcagcgacaggccataggtttcctgcctttgggacaggcctcttcatag
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