Mycobacterium tuberculosis F11: TBFG_11324
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Entry
TBFG_11324 CDS
T00545
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
mtf
Mycobacterium tuberculosis F11
Pathway
mtf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBFG_11324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtf03021
]
TBFG_11324
03019 Messenger RNA biogenesis [BR:
mtf03019
]
TBFG_11324
Transcription machinery [BR:
mtf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TBFG_11324
Messenger RNA biogenesis [BR:
mtf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TBFG_11324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
VWA_2
CoV_NSP2_C
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
ABR05667
LinkDB
All DBs
Position
1456971..1458779
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AA seq
602 aa
AA seq
DB search
MTDTDLITAGESTDGKPSDAAATDPPDLNADEPAGSLATMVLPELRALANRAGVKGTSGM
RKNELIAAIEEIRRQANGAPAVDRSAQEHDKGDRPPSSEAPATQGEQTPTEQIDSQSQQV
RPERRSATREAGPSGSGERAGTAADDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ
QARGDEDGEARQGRRGRRFRDRRRRGERSGDGAEAELREDDVVQPVAGILDVLDNYAFVR
TSGYLPGPHDVYVSMNMVRKNGMRRGDAVTGAVRVPKEGEQPNQRQKFNPLVRLDSINGG
SVEDAKKRPEFGKLTPLYPNQRLRLETSTERLTTRVIDLIMPIGKGQRALIVSPPKAGKT
TILQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAEL
AIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAAR
NIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGT
RKDELLLSPDEFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKTTPGSMD
SD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcattacggctggcgaaagtaccgacggcaagccgtcggatgcc
gctgccacagatcccccagacctcaacgccgacgagccggccggctcgctggccaccatg
gtgctgcccgaactgcgtgcgctggctaatcgagccggcgtgaagggaacatcgggtatg
cggaagaacgaactgatcgctgcgattgaggagatcaggcgacaggccaacggcgcccca
gccgttgaccggtcggctcaagagcacgacaagggcgaccggccgcccagttccgaggca
ccggccacccagggggaacagaccccgaccgaacagatcgattcccaaagccaacaggtc
cgcccggagcggcgcagcgccacccgtgaagcgggaccctccggctccggtgagcgtgcg
ggcacagccgcagacgacaccgacaaccgccaaggcggtcaacaggacgccaagaccgag
gagcgtggcaccgacgcgggtggcgaccaagggggtgaccagcaggcttcgggcggtcag
caggcgcgcggcgacgaggacggagaagcgcgtcagggccggcgcggacgccggttccgc
gatcggcggcgccgcggtgaacgatccggcgacggcgccgaggctgaactgcgtgaggac
gacgtcgtccagccggtagccggcatactcgacgtcctggacaactacgcgtttgtgcgc
acctccggctacctacccggtccgcacgacgtgtatgtgtcgatgaacatggtgcgcaag
aacggcatgcgccgtggtgatgcggtgaccggtgcggtgcgggtgcccaaggaaggggag
caacccaaccagcggcagaagttcaacccgctggtccgcctggacagcatcaacggcgga
tcggtcgaagacgccaagaagcggcccgagttcggcaaactgacgccgttgtaccccaac
cagcggcttcgtctggaaaccagtaccgagcggctgaccacccgggtcatcgacctcatc
atgccgatcggcaagggtcaacgcgcgttgattgtgtcgccgcccaaagcgggcaagaca
acgatcctgcaggacatcgccaacgcgatcaccaggaacaacccggaatgccacctcatg
gtcgtgctcgtcgacgagcggcctgaggaggtcaccgatatgcagcgctcggtcaaaggc
gaggtcatcgcttcaactttcgaccggccgccgtcggaccacacgtcggtcgccgagctg
gcgatcgaacgcgccaagcggctggtggagcaaggcaaggacgtcgtggtgctgctcgat
tcaatcacccggctaggccgcgcttacaacaacgcgtcgccggcgtcgggccggatcctg
tccggtggtgtcgattccacggcgttgtacccgcccaagcgcttcctgggggccgcgcgc
aacatcgaagagggcgggtcgctgaccatcatcgccactgcgatggtcgagaccgggtcc
actggtgacacggtcattttcgaggagttcaagggcaccggcaacgccgagctcaagctg
gaccgcaagatcgccgagcggcgggttttccctgcggtcgacgtgaacccttctggaacc
cgcaaggacgagctactgctgtcgcccgacgagttcgctattgtgcacaagctgcgccgc
gtgctatcgggcctggattcccaccaggccatcgacctgctgatgtcgcagctgcgtaag
acgaagaacaactacgaattccttgttcaggtgtccaagaccacgccagggtccatggac
agcgactga
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