Mycobacterium tuberculosis F11: TBFG_12650
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Entry
TBFG_12650 CDS
T00545
Name
(GenBank) conserved hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mtf
Mycobacterium tuberculosis F11
Brite
KEGG Orthology (KO) [BR:
mtf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtf03016
]
TBFG_12650
Enzymes [BR:
mtf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TBFG_12650
Transfer RNA biogenesis [BR:
mtf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TBFG_12650
Prokaryotic type
tRNA splicing ligases
TBFG_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABR06977
LinkDB
All DBs
Position
2970889..2972187
Genome browser
AA seq
432 aa
AA seq
DB search
MQVVNVATLPGIVRASYAMPDVHWGYGFPIGGVAATDVDNDGVVSPGGVGFDISCGVRLL
VGEGLDREELQPRLPAVMDRLDRAIPRGVGTAGVWRLPDRNTLQEVLTGGARFAVEQGHG
VALDLERCEDGGVMTGADAAKISDRALQRGLGQIGSLGSGNHFLEVQAVDRVYDPVAAAP
MGLAEGTVCVMIHTGSRGLGHQICTDHVRQMEQAMGRYGIAVPDRQLACVPVHSPDGQAY
LAAMAAAANYGRANRQLLTEATRRVFADATGTPLDLLYDVSHNLAKIETHPIDGQLRSVC
VHRKGATRSLPPHHHELPAELAAVGQPVLIPGTMGTASYVLAGVTGNPAFFSTAHGAGRV
LSRHQAARHTSGEAIRASLAKRGIIVRGTSRRGIAEEKPEAYKDVDEVIEASHQSGLARK
VARLVPLGCVKG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggtcaacgtggctacgctgccggggattgtccgggcctcgtatgcgatgccc
gatgtgcactggggatatggtttcccaatcggcggcgtggccgcaaccgacgtcgacaat
gatggagtcgtttccccaggcggtgtcggcttcgatatttcgtgcggcgtaagactcttg
gtcggcgaagggctggaccgcgaggagctgcaaccacggttgccggcggtcatggaccgg
cttgatcgcgcgataccgcgcggagtgggcacggcgggtgtgtggcgactacccgaccgg
aacacgctgcaggaggtgctcaccggtggtgcccggtttgcggtggaacaggggcatggc
gtcgcgctagacctcgagcggtgcgaagacggcggtgtgatgacaggagcggacgcggcc
aaaatcagtgaccgggccctccaacgcgggcttgggcagatcggcagccttggctcgggc
aaccacttcctggaagtccaggccgtggaccgcgtctacgatccggttgcggccgcgccg
atgggtctggcggaagggaccgtctgcgtgatgatccacaccggctcacggggcctgggc
catcagatctgcacggatcacgtccgccagatggaacaagccatgggccgatacggaatc
gcggtgcccgatcgccaattggcttgtgtgccggtgcactcccccgatgggcaggcctat
ctcgccgcgatggcggcggcggccaactacggacgcgccaaccgccaactgctgaccgag
gcgacgcgtcgtgtgttcgctgatgcaaccggaacacctctggacctgctctacgacgtg
tcgcacaacctggccaagatcgagacgcatccgatcgacggtcagctgcgctcggtgtgc
gtgcaccgcaagggcgccacccgctcgctgccgccgcaccatcacgagctgccggccgaa
ctggcagcggtcggccaacccgtgctgatacccgggacgatgggtacggcgtcatatgtg
cttgccggggtcaccggcaacccggcgttcttttccaccgcgcatggtgctgggcgggta
ctgagccgtcaccaggccgcccgccacaccagcggtgaagcgatacgcgccagcctcgca
aaacgtggcatcatcgtccgcggtacctctcgtaggggtatcgccgaggaaaagccggag
gcctacaaagacgtcgacgaggtcatcgaagccagccatcagagtggcctcgcgcgcaaa
gtggctcgccttgttcccttgggctgtgtcaaaggatga
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