Methanothermobacter thermautotrophicus: MTH_1385
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Entry
MTH_1385 CDS
T00009
Name
(GenBank) replication factor A related protein
KO
K07466
replication factor A1
Organism
mth
Methanothermobacter thermautotrophicus
Pathway
mth03030
DNA replication
mth03420
Nucleotide excision repair
mth03430
Mismatch repair
mth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTH_1385
03420 Nucleotide excision repair
MTH_1385
03430 Mismatch repair
MTH_1385
03440 Homologous recombination
MTH_1385
03460 Fanconi anemia pathway
MTH_1385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mth03000
]
MTH_1385
03032 DNA replication proteins [BR:
mth03032
]
MTH_1385
03400 DNA repair and recombination proteins [BR:
mth03400
]
MTH_1385
Transcription factors [BR:
mth03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MTH_1385
DNA replication proteins [BR:
mth03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MTH_1385
DNA repair and recombination proteins [BR:
mth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MTH_1385
MMR (mismatch excision repair)
MTH_1385
DSBR (double strand breaks repair)
HR (homologous recombination)
MTH_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
SHLD2_OB1
DUF5088
MlaD
Motif
Other DBs
NCBI-ProteinID:
AAB85862
UniProt:
O27438
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1251738..1253606)
Genome browser
AA seq
622 aa
AA seq
DB search
MKEELKREYERIKDRISPEEFEELIEKKKEELGDIGFMDDLTIASTVVDDILKEKNTMLS
EKPEHRMDTISKLEEGAETPVTGRVMKISSPRTFTTRKGREGKLANVIIADDTGELRAVF
WTENIKLLKKFREGDVIRIKDVNIRGGFGGRKEAHLMPRSTVEVLDPEDYPEFPEYREEI
TPIGDLVEDDEVNVIARITGVSRVRTFERDGREGRFISLDIMDATGSTTYTLWNNDVNLV
EELGLKEGDAVKILWAQPRRRDDKVTLTHTSLTRVVPGEYDVPEFREELVKIGDLHEMRN
VTVMGLVTKVNDPVEFERNDGTTGSVKSIEIADDTGSARVTLWDEDTRIKINKGDIIRIS
GANVEFDDFNQSYRINTNFNTRITLNPESDGALLKVLEEYREQMRPMKISEILEMEDEGE
EVDVVGRIFSLSDPREFEREDGTGIVRSMELADETGKIRISLWDEKAEKPMNIGDAVRIE
NARIRLGLYSVELSAGRTTRIVNPLPEDMEDLPSFEELEEMLYQTKKIADLEEDDRNIRI
IARVVDLFEPREFQRGDGTPGLVRTAEFADDTGSIRASLWDDAAEKPLSIGDPVKIENPR
VVFRDDMGGGRLETQHRKQFKD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaattgaagagggaatatgaaagaattaaggacaggatctcccctgaggaa
tttgaggaactcatagaaaaaaagaaagaggaattaggggacataggattcatggatgac
cttaccattgcatcgacagtcgttgatgatatcctgaaggaaaaaaacaccatgctatcc
gagaaacccgaacacaggatggacacaatatccaagcttgaggagggagccgaaacccct
gtgacagggagggtcatgaagatatcaagccccaggaccttcaccaccaggaagggaagg
gaggggaaactcgccaacgtgataatcgcagatgatacaggtgaactcagggcagtgttc
tggacagagaacatcaagctcctcaagaaattcagggagggcgatgtgataaggataaag
gatgttaacataaggggaggattcggcggcaggaaggaggcccacctcatgccaagatcc
accgtggaggtccttgaccccgaggactaccctgaattccctgagtaccgtgaggagata
accccgataggagatctggtggaggatgatgaggtcaatgtcatagcaaggatcacagga
gtatcccgtgtaaggacctttgagagggacggaagggagggcaggttcatctccctggac
atcatggatgcaacgggttcaacgacctacaccctctggaacaatgacgtaaacctcgtt
gaggaactgggactgaaggagggtgatgcagtgaagatactctgggcccagccaaggaga
agggacgataaggttaccctcacccacaccagcctcacaagggtggtgccgggtgaatac
gatgtacctgaattcagggaggagctcgtgaagataggggacctccatgagatgagaaac
gtcactgtgatgggccttgtgacaaaggtcaatgacccggtagaatttgagagaaacgac
ggcacaacaggttctgtgaagtccattgagatagccgatgacacgggatctgcaagggta
accctctgggatgaggatacacgcatcaaaatcaacaagggggatatcatcaggatatca
ggtgccaatgtcgagttcgatgacttcaaccagtcctacaggataaacacgaacttcaac
acccgcatcaccctcaaccctgaatccgacggtgcactgctgaaggtccttgaggagtac
agggaacagatgaggccaatgaagatatctgagatacttgaaatggaggatgagggagag
gaagtcgatgtcgttggaaggatcttcagcctcagtgacccccgcgaatttgagagggaa
gacgggaccggaatcgtgaggtcaatggaacttgccgatgagacaggcaagataaggatc
agtctctgggatgaaaaggccgagaaacccatgaatatcggcgacgcagtcagaatagaa
aacgcacgcataaggcttggactctacagcgtggaactcagcgccggacgaacaacaagg
atagtgaaccccctgccagaggacatggaggaccttccatcctttgaggaacttgaggag
atgctctatcagacaaagaaaatagccgacctcgaggaggacgacaggaacataaggata
attgcaagggtcgttgacctctttgaacccagggagttccagaggggtgacggcaccccc
ggacttgtgaggacagctgaattcgctgatgacacgggatcaataagggccagcctctgg
gacgatgctgctgagaaacccctgagcataggggaccccgtcaagatagaaaatccccgg
gtggttttcagggatgatatgggtggtggaagacttgaaactcagcataggaaacagttc
aaggattga
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