Methanothermobacter thermautotrophicus: MTH_1597
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Entry
MTH_1597 CDS
T00009
Name
(GenBank) conserved protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mth
Methanothermobacter thermautotrophicus
Brite
KEGG Orthology (KO) [BR:
mth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mth03016
]
MTH_1597
Enzymes [BR:
mth01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MTH_1597
Transfer RNA biogenesis [BR:
mth03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MTH_1597
Prokaryotic type
tRNA splicing ligases
MTH_1597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AAB86070
UniProt:
O27634
LinkDB
All DBs
Position
complement(1462386..1463852)
Genome browser
AA seq
488 aa
AA seq
DB search
MMEMVCMSIHEELVKVRESVWEVPTSYKKGMRVPGRIFLREEALRDLEKGAIDQVANVAC
LPGIQKFSIGLPDIHFGYGFSIGGVGAFSARTGVISPGGVGFDINCGVRMVRTNLDHEDV
RPKIKELINTLFTNVPSGVGSKGKIRLKPGEIDEVLENGAEWAVENGYGWDQDLRRLEEN
GKMEDASSEKVSEKAKKRGIPQLGSLGSGNHFLEVQMVDEIFDEEAARVYGVSPGKVAVM
IHSGSRGCGHQICSDYLRLMDKAYRRYKINIPDRQLACAPVDSDEALDYFQAMAAAANYA
WANRQMIVHWVRESFEAVFGMTAEDMEMEIVYDVAHNIAKKEVHTIKGRETEVFVHRKGA
TRAFGPGRDEIPQEYRKIGQPVIIPGTMGTSSYLLHGTEVAMEETFGSTAHGAGRKMSRA
GAKKTYRGEEVQRKLESEGIYVRATSMPVVAEEAPGAYKDVDVVVRTAHETGISRLVARM
LPLGVAKG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatggagatggtttgcatgagtatacatgaagaactggttaaggtgagagaatccgta
tgggaagttccaacatcatacaagaaggggatgagggtgcccgggaggatcttcctgagg
gaggaggccctcagggaccttgagaagggtgccatcgatcaggtggccaatgttgcctgt
ctcccgggtatccagaagttttccattggactgccagatattcacttcggttacggcttc
agcattggaggtgtgggtgccttcagcgcccgaacaggagttataagccctggaggtgtt
ggattcgatataaactgtggtgtgaggatggtcaggacaaaccttgaccatgaggatgtc
aggccaaagataaaggagctcataaacacactcttcaccaatgtcccctccggtgttggg
agtaaggggaagatacgcctgaaacccggggagatcgatgaggtgcttgaaaacggggct
gaatgggccgttgaaaacggatacggctgggaccaggacctcaggcgccttgaagaaaac
ggtaaaatggaggatgccagctcagaaaaggtcagtgaaaaggccaagaagaggggcata
ccccagctcggatcccttggctcaggtaaccacttcctcgaggtccagatggttgatgag
atcttcgatgaggaagcagctagggtctacggtgtgagccccggaaaggtcgccgtcatg
atacactcaggttcacgtggctgcggccaccagatctgctcagattacctcaggctcatg
gacaaggcatacaggaggtacaagataaacatacctgacaggcagcttgcatgcgcccct
gtggactcggatgaggccctggattacttccaggccatggcagcagctgcaaattatgcc
tgggccaaccgtcagatgatagtccactgggtcagggaatcctttgaggccgtcttcggt
atgactgcagaggacatggagatggaaatcgtctatgacgtggcccacaacatagccaag
aaggaggtccacaccataaagggtcgtgaaacagaggtattcgtccacaggaagggggct
acaagggcctttggaccgggaagggatgagatacctcaggagtaccggaaaatcggtcaa
ccggtgataataccggggacaatgggaacatcatcctacctgctccacggaacagaggtt
gccatggaggagaccttcggttcaaccgcccacggcgccgggcgtaagatgagccgtgca
ggtgccaagaagacctaccgcggcgaggaggtccagaggaaacttgaaagtgagggcatc
tatgtcagggccacctccatgcctgtggttgcagaggaggcccccggggcctacaaggac
gtggacgtcgttgttagaaccgcccatgaaacaggaatatcccgccttgtggcgaggatg
ctccccctcggcgttgccaagggatag
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