Methanothermobacter thermautotrophicus: MTH_1639
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Entry
MTH_1639 CDS
T00009
Name
(GenBank) cell division control protein Cdc48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mth
Methanothermobacter thermautotrophicus
Pathway
mth04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MTH_1639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mth03019
]
MTH_1639
03009 Ribosome biogenesis [BR:
mth03009
]
MTH_1639
04131 Membrane trafficking [BR:
mth04131
]
MTH_1639
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mth04147
]
MTH_1639
Messenger RNA biogenesis [BR:
mth03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MTH_1639
Ribosome biogenesis [BR:
mth03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MTH_1639
Membrane trafficking [BR:
mth04131
]
SNARE
SNARE associated proteins
Others
MTH_1639
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MTH_1639
Exosome [BR:
mth04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MTH_1639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_2
AAA_16
CDC48_2
RuvB_N
TIP49
AAA_22
AAA_14
AAA_33
AAA_lid_PRS2_C
AAA_5
nSTAND3
NPHP3_N
Sigma54_activat
Zeta_toxin
AAA_28
Mg_chelatase
RNA_helicase
AAA_3
ATPase
AAA_7
ABC_tran
IstB_IS21
NB-ARC
Viral_helicase1
TsaE
SLFN-g3_helicase
DUF815
AAA_18
AAA_24
PhoH
Parvo_NS1
Bac_DnaA
ATP-synt_ab
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAB86112
UniProt:
O27676
LinkDB
All DBs
Position
complement(1503535..1505733)
Genome browser
AA seq
732 aa
AA seq
DB search
MGCMTKKEIKLKVAEALAQQDVGRGIARVDPACMEKLGLSDGDIIEIEGKKLTAATVVSS
QSDIGLGIIRIDGYLRKNAGASIGEEVTVRRADVKDAQKVVLAPVDQEVIIRGDIRSAFL
NRVLVKGDIIVSGIRQHISGGGLFDEFFRDFMDISPLGEIKLAVVSTSPAGVVRVTPSTQ
VEMQQKPVDVSKLEGVKNLVDVTYEDIGGLKEEVKKVREMIEIPLKRPELFERLGITPPK
GVLMHGPPGTGKTLLAKAVANESDAHFIAINGPEIMSKYVGGSEERLREFFEEAEENAPS
IIFIDEIDAIAPKREDVSGEVERRIVAQLLTLMDGLKSRGQVVVIGATNRPDALDPALRR
PGRFDREIEIGVPDREERKEILQIHTRGMPLADDVDLDELAEITHGFVGADLESLCKESA
MRVLRRVLPEIKADEEIPKEVLKKMVVTRADFKDALKEIQPSALREVLVQVPNVSWDDIG
GLEGAKQELREAVEWPLKYPDRFKKFGIRPPKGILLHGSPGTGKTLLAKAVANESQANFI
AVKGPELLSKWVGESEKGVREVFRKARQTAPTVIFFDEIDSIASVRSGSTADSGVTQRVV
NQLLTEIDGLEELQDVAVIAATNRPDILDPALLRPGRFDRHVKVEDPDKEARLAIFRVHT
KDMPLADDVDLEKLAEKTEGYVGADIEAVCREAAMLTLRDNMDAEEVSMKYFLEAMEKVK
PKGGVEEQVQYH
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgggttgtatgacaaaaaaagagataaaattaaaggttgcagaggccctggcccagcag
gacgtcgggaggggaatagcccgtgtggaccctgcatgcatggaaaaactgggtctttcg
gatggagacataattgaaatagagggcaaaaaactgacagctgcaacggtagtatcatca
cagtccgacataggactcggaataataaggatagacggatacctccgtaaaaacgccggc
gcatccataggcgaagaggtgacagtcagaagggccgacgttaaggacgcccagaaggtc
gttctggccccagtggaccaggaggtcataataaggggggacataagatcagcattcctc
aacagggtacttgttaagggagacataatagtatcaggtatcagacagcatatatccggc
ggcggactcttcgacgagttcttcagggacttcatggacatatcacccctcggagagatc
aaactggccgtcgtatcaacaagtcccgcaggtgttgtgcgtgtaacaccctcaacacag
gtcgagatgcagcaaaaacccgtggacgtcagcaaactcgagggcgtcaagaacctcgtt
gatgtcacctacgaggacatcgggggcctcaaggaggaggtcaaaaaggtccgggaaatg
atagagatccccctcaagagaccggaactcttcgaaaggcttggaataacaccaccaaag
ggtgtcctcatgcacggaccaccaggaacaggtaaaacactcctggcgaaggccgttgcc
aacgagagcgacgcccacttcatagccatcaacgggcccgagataatgagcaaatacgtc
ggggggtccgaggagaggctcagggaattcttcgaggaagcagaagagaacgctccatca
atcatattcatcgatgagatagacgccatagcgcccaaaagggaagacgtgagcggagag
gttgaaaggaggatcgttgcccagctcctcaccctgatggacggcctcaagagcaggggc
caggttgttgtcataggtgcaaccaacagacccgacgcccttgaccctgcactcagaagg
ccgggccgctttgacagggaaatcgagataggagtccctgacagggaggaaaggaaggag
atactccagatacacaccagggggatgccccttgcagatgacgttgacctcgatgaactg
gcagagataacccatggatttgtgggtgcagaccttgagtcactctgtaaggaatccgcc
atgagggtcctgaggagggtgctcccggagataaaggctgatgaggagatacccaaggag
gtcctcaagaagatggtggtaacaagggccgacttcaaggacgccctcaaggagatacag
ccatcagccctcagggaggtcctggtacaggtccccaatgtttcatgggacgacatagga
ggcctggagggcgcaaagcaggagctgagggaggctgttgagtggcccctcaagtacccc
gacagattcaagaagtttggaataagaccacctaagggtattctcctgcacggatcaccg
ggtaccggtaaaacactcctggcgaaggccgttgccaatgagagccaggcaaacttcata
gcggttaagggtccggagctcctgtcaaagtgggtcggtgaatcagagaagggtgtgcgt
gaagttttcagaaaagcacgtcagacagctcccacagtgatattcttcgatgagatagac
tcaatagcctcagtgaggagtggaagcaccgccgactccggcgtaacccagagggtggtc
aaccagctgctcacagagatcgatggacttgaagagctgcaggatgtggcggttatagcc
gcgacaaacaggcccgacatcctcgaccccgcactcctcaggcctggaagattcgacagg
cacgtcaaggttgaggatccagataaggaggcaaggctcgcaatattcagggtccacaca
aaggacatgccccttgcagatgacgttgatcttgaaaaacttgcagagaaaactgaggga
tacgtcggtgcagacattgaggctgtatgcagagaagccgccatgctgaccctcagggat
aacatggacgccgaggaggtctcaatgaagtacttccttgaggccatggagaaagtaaaa
ccaaagggcggcgtagaggagcaggtccagtaccactaa
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