Methanothermobacter thermautotrophicus: MTH_203
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Entry
MTH_203 CDS
T00009
Name
(GenBank) ATP-dependent RNA helicase, eIF-4A family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mth
Methanothermobacter thermautotrophicus
Pathway
mth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTH_203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mth03019
]
MTH_203
03009 Ribosome biogenesis [BR:
mth03009
]
MTH_203
Enzymes [BR:
mth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTH_203
Messenger RNA biogenesis [BR:
mth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTH_203
Ribosome biogenesis [BR:
mth03009
]
Prokaryotic type
rRNA helicases
MTH_203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5333
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAB84709
UniProt:
O26305
LinkDB
All DBs
Position
complement(145102..146379)
Genome browser
AA seq
425 aa
AA seq
DB search
MKGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAI
PVLENLEAERVPQALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQSIGNQIAQLRR
GVHVIVATPGRLIDHIERGTVDLGGISTVVLDEADEMLNMGFIDDIERILSHVPERRQTM
LFSATVSKPILRIARKYMRNPQVMRVEKKHSPKIDEFYFKTREEDKVELLDWILSSNNIR
MGLIFCNTKRRVQRLRRQLNRMGYSADEIHGDLSQSKRERVMERFRRGDFSLLVATDVAA
RGIHVPDVEAVVNYDLPFENEYYVHRIGRTGRAGSSGKSFTLVVGSEVHRLRRIQSFTGK
RIKQSNMPSPEEIRRGYEMDLREILRRNLESKTYSDSEILESLAGEGYSFRDISHALLDV
LESSK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggattagaatttagtgagtttgatatctcaggggatataaacagggcccttgat
gatatgggatttgagagcacaactccaatccaggcacttacactacctgttacacttgac
ggtatggacgttgttggtgaggcccagacagggaccggaaaaacagctgcattcgccata
cccgtacttgagaaccttgaagccgagagggtgccccaggccctcataatctgtccgaca
cgcgagctctgtctccaggtctcagaggagatcaagaggataggtaaatacatgaaggtg
aaggtcctcgcggtctatggtggtcagagtatcggtaaccagatagcacagctaaggagg
ggggttcatgtcatcgttgcaacccctggtagactgatagaccacatcgagagggggacc
gttgatctgggaggtatatccaccgttgtccttgatgaggcagatgaaatgctgaacatg
ggattcattgatgacatagagcgtatactatcccatgtacctgagagaaggcagaccatg
ctcttctctgcaacggtttcaaagcccatactcaggattgcaaggaagtacatgaggaac
ccccaggttatgcgtgtggagaagaagcacagccccaagatagatgagttctacttcaaa
accagggaggaggataaggttgagctcctcgactggatactctcatcaaacaatatcagg
atgggactcatattctgtaacaccaagagaagggtccagaggttgagaaggcagctgaac
cgtatgggttactctgcagatgagatccacggtgatctttcacagtcaaagcgtgagcgt
gtcatggagagattcagaaggggagatttcagtctccttgttgcaacggatgttgctgcc
cgtggtattcacgtacccgatgtcgaggccgttgtgaactatgacctgccctttgagaac
gagtactacgttcaccgtataggccgtacagggcgagccggttcaagcgggaagtccttc
accctcgtcgttggaagtgaggttcaccgcctgagaaggatccagtcattcacaggtaag
aggataaagcagagcaacatgccctcccctgaggagataaggaggggatatgagatggac
ctcagggagatcctcaggaggaacctggaatcaaagacttacagtgactctgaaatcctt
gagagccttgctggtgagggttacagtttcagggacatctcacacgcccttctggatgta
ctggaatcatccaaataa
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