Methanothermobacter thermautotrophicus: MTH_49
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Entry
MTH_49 CDS
T00009
Name
(GenBank) conserved protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mth
Methanothermobacter thermautotrophicus
Pathway
mth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTH_49
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mth03019
]
MTH_49
Messenger RNA biogenesis [BR:
mth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTH_49
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AAB84556
UniProt:
O26155
LinkDB
All DBs
Position
27281..28633
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AA seq
450 aa
AA seq
DB search
MSVEVIAIGGYEEVGKNMSAVKVGDDVVIFDMGIHLDRVHIHEDTDIARMHSLDLIERGV
IPDDTLMKDVDGKVRAIVFTHGHLDHIGAVAKLAHRYQAPIIATPYTIALIERTIKAERK
FNVLNTLQVLNAGEKCQISPGITLEFIQSTHSIPQSVIAALHTPEGIIVYALDFKFDDHQ
KISPPPDYHRLRELGRKGVLAMIVETTRANEKQEVKTHSEKVARIVLEDIMKNPLEEKTG
MIVTTFSSHMERIQAISDIASKSDRQMLLLGRSMERYCGLAEAMGILKLPENASIYGSPK
AVNRALARAEAKREDYLLITTGHQGEPDALLPRIANAKTQFRIQRGDNVVISAPVIPNPM
NVANRNLMERRLASSGARIYTNAHVSGHAGREDHRDFIRMLNPMHIIPAHGDLSMLSAYA
EIAEEEGYKLGNDIHILRNGQAQVFNGGIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgtagaagtaattgcgatcggcggatacgaggaagttggtaagaacatgtccgcc
gttaaggtaggagatgacgttgtaatatttgatatggggattcaccttgacagggttcac
atacatgaggacacagatatagcaaggatgcacagcctcgacctcattgagaggggggtc
atccccgacgataccctcatgaaggacgttgacgggaaggtcagggccatagtattcacc
catgggcaccttgaccatataggggcagttgcaaaactcgcccacaggtaccaggcgccc
ataatagcaacaccctacaccatagcactcatagagagaacaataaaggctgagaggaag
ttcaacgtcctcaacacactccaggtactgaacgccggggagaagtgtcagatatcaccg
ggtataaccctggagttcatccagtcaacccacagcataccccagtcagtgatagcagcc
ctgcacacaccggagggcataatagtctatgcactggacttcaaattcgacgaccaccag
aagatatccccaccaccagactaccaccgtctcagggaacttggaaggaagggcgtcctc
gccatgatagtcgagacaacaagggccaatgagaagcaggaggtcaagacccactcagag
aaggttgcaaggatagtcctggaggacataatgaagaaccccctggaggagaagaccggg
atgatcgtgacaaccttctcatcccacatggaacgtatacaggccataagtgacatagca
tcaaagagcgacaggcagatgcttctcctgggaaggtcaatggagcgctactgtggactc
gcagaggcaatggggatcctgaaactccctgagaatgcgagcatatatggaagtcccaag
gcagttaacagggcccttgcacgtgcagaggcaaagcgcgaggactacctcctcataacc
acgggacatcagggggaacccgacgcactgctcccaaggatagccaatgcaaagacccag
ttcaggatacagaggggtgataatgttgtgatatcagccccggtcatcccgaaccccatg
aacgttgccaacaggaacctgatggagaggcgtctggcatcaagcggtgccaggatctac
accaacgcccatgtgtcagggcatgctggaagggaggaccacagggacttcataagaatg
ctgaaccccatgcacataatacctgcccacggtgacctgagcatgctctcggcctacgca
gagatagcagaggaggagggctacaagctgggtaacgatatacatatcctaaggaatgga
caggcacaggtctttaatggaggtatccgatga
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