Entry |
|
Name |
(GenBank) ribonuclease PH
|
KO |
K11600 | exosome complex component RRP41 |
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Organism |
mth Methanothermobacter thermautotrophicus
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mth00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTH_683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mth03019]
MTH_683
Messenger RNA biogenesis [BR:mth03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MTH_683
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MTH_683
|
SSDB |
|
Motif |
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Other DBs |
|
Structure |
|
LinkDB |
|
Position |
complement(610880..611602)
|
AA seq |
240 aa
MITIITQDQLKTSPSVREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPR
EAQIRKLQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPR
SVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEED
KEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRKRYGE |
NT seq |
723 nt +upstreamnt +downstreamnt
gtgattactatcatcacacaggatcaattgaagacctcccccagcgtcagggaggatgga
agggcgtttgatgaactcaggcccttaaaaatcgaggcagggatacttgaaagggcagat
ggttcatcttaccttgaatttggcggtaacaagatactggtggctgtatacggtccaagg
gaggctcagataagaaagctgcagagacctgacagggccgtcataaggtgcaggtacaat
atggcaccattctcagttgaggagcgaaagagaccgggccctgacaggcgttccgttgag
atctccaagataactgcagaggccctcagaccggcactgatacttgaaaaattccccaga
tcagtcatcgatgtattcatagaggtgcttgaggctgagggaggtacgaggtgtgctggc
ataacagcggcttcagtcgcccttgcagatgcaggaatacccatgagggacatggttgtt
gcctgtgcagcaggtaaggtcggtgatcaggtggtccttgacctctctgaggaggaggac
aaggagggccaggcagacgtaccggtggcgatactcccgaggacacgtgaaatcacactg
ctccagagtgatggaaacctcacacccgaggaatttgaaagggcacttgaccttgcagtg
gagggatgcctccggatacatgaggtgcagaaggaggccctcagaaagaggtatggtgaa
taa |