KEGG   Methanothermobacter thermautotrophicus: MTH_683
Entry
MTH_683           CDS       T00009                                 
Name
(GenBank) ribonuclease PH
  KO
K11600  exosome complex component RRP41
Organism
mth  Methanothermobacter thermautotrophicus
Pathway
mth03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MTH_683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mth03019]
    MTH_683
Messenger RNA biogenesis [BR:mth03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MTH_683
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MTH_683
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: AAB85188
UniProt: O26779
Structure
LinkDB
Position
complement(610880..611602)
AA seq 240 aa
MITIITQDQLKTSPSVREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPR
EAQIRKLQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPR
SVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEED
KEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRKRYGE
NT seq 723 nt   +upstreamnt  +downstreamnt
gtgattactatcatcacacaggatcaattgaagacctcccccagcgtcagggaggatgga
agggcgtttgatgaactcaggcccttaaaaatcgaggcagggatacttgaaagggcagat
ggttcatcttaccttgaatttggcggtaacaagatactggtggctgtatacggtccaagg
gaggctcagataagaaagctgcagagacctgacagggccgtcataaggtgcaggtacaat
atggcaccattctcagttgaggagcgaaagagaccgggccctgacaggcgttccgttgag
atctccaagataactgcagaggccctcagaccggcactgatacttgaaaaattccccaga
tcagtcatcgatgtattcatagaggtgcttgaggctgagggaggtacgaggtgtgctggc
ataacagcggcttcagtcgcccttgcagatgcaggaatacccatgagggacatggttgtt
gcctgtgcagcaggtaaggtcggtgatcaggtggtccttgacctctctgaggaggaggac
aaggagggccaggcagacgtaccggtggcgatactcccgaggacacgtgaaatcacactg
ctccagagtgatggaaacctcacacccgaggaatttgaaagggcacttgaccttgcagtg
gagggatgcctccggatacatgaggtgcagaaggaggccctcagaaagaggtatggtgaa
taa

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