KEGG   Methanothermobacter thermautotrophicus: MTH_878
Entry
MTH_878           CDS       T00009                                 
Name
(GenBank) peptide chain release factor eRF, subunit 1
  KO
K03265  peptide chain release factor subunit 1
Organism
mth  Methanothermobacter thermautotrophicus
Pathway
mth03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mth00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MTH_878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mth03019]
    MTH_878
   03012 Translation factors [BR:mth03012]
    MTH_878
Messenger RNA biogenesis [BR:mth03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     MTH_878
Translation factors [BR:mth03012]
 Eukaryotic type
  Release factors
   MTH_878
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 baeRF_family10 acVLRF1 DUF7129 Zn_ribbon_8 Zn_ribbon_TFIIB HypA PrkA DUF3300 RNHCP DZR Zn_ribbon_6 RUBY_RBDX
Other DBs
NCBI-ProteinID: AAB85376
UniProt: O26964
LinkDB
Position
complement(798887..800110)
AA seq 407 aa
MSEPSSKELFEFKRTLQELSDKRGRGTELVSVYIPPDRQISDVAKHMREELSQSANIKSK
QTKKNVQSAIEVIMQRLKLFPKPPEKGLVMFVGMVPRGGPGTEKMETYVFEPPEPIKTYI
YHCNSEFYLEPLREMLEEKETYGLAVLDRKEATIATLKGKRIDILKTLTSGVPGKHKAGG
QSQRRFDRLIDLAAHEFLKRIGEHMNEAFLQIDDLKGIILGGPGHTKEEFLNGDYLHHEL
KKKVITTVDTSYTGEFGIREVIDKSMDVLSEIDVMREKKLVQRFLRELINEDGLASYGER
EVRQHLQMGAVEVLLLSEDLKYQRGTYECASCGHRMEKTGRDLPDTETCPSCNDQMRLSD
RRDMIDDLVEMAEEVGTEVEIISTETEEGMQLLRAFGGIGAILRYRP
NT seq 1224 nt   +upstreamnt  +downstreamnt
gtgagcgaaccatcatcaaaggagcttttcgaattcaagaggaccctccaggaactctca
gacaagaggggcagggggacggaactcgtatcggtatacataccccctgaccggcagata
agtgacgttgcaaagcatatgagggaggaactgagccagagtgccaacataaagagcaaa
cagacgaagaagaacgtccagtcagccattgaggttataatgcagaggctcaaactattc
ccgaaaccacccgagaaggggctcgtcatgttcgtcggcatggttcccaggggaggcccg
ggtacagagaagatggagacctacgtattcgagccacctgaacccatcaagacatacata
taccactgtaactcagagttctaccttgaaccactgagggagatgcttgaggagaaggaa
acctatggcctcgcagtccttgacaggaaggaggccacaatcgcaaccctgaagggtaag
aggatagacatactcaagacactcaccagtggggttccaggtaaacacaaggccggtgga
cagtcccagaggaggttcgacaggctcatagaccttgcagcccatgagttcctcaagagg
ataggggaacacatgaatgaggccttccttcagatagatgacctcaagggcataatcctc
gggggcccgggtcacacaaaggaggagttcctcaacggcgactacctccaccatgaactg
aagaagaaggtcataacgactgtggacacatcctacacaggggagttcggtataagggag
gtcatagacaagtcaatggatgttttaagtgaaatagatgttatgagggagaagaaactt
gtccagagattcctcagggaactcataaatgaggatggactcgcatcctacggtgaaagg
gaggttcgacagcacctccagatgggtgcggttgaggttcttcttctctcagaggacctt
aagtaccagagggggacctacgagtgtgcatcctgcggacacaggatggagaagacgggc
agggaccttccggatactgaaacctgtcccagctgcaacgatcagatgagactctcagat
aggagggacatgatcgacgacctcgttgagatggccgaggaggtcggaaccgaggttgaa
atcatatcaactgagaccgaggagggaatgcagcttctgagggcctttgggggcataggg
gcgatactgaggtaccgcccctga

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