Methylophaga thalassica: VSX76_00090
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Entry
VSX76_00090 CDS
T09743
Name
(GenBank) isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00500
Starch and sucrose metabolism
mtha01100
Metabolic pathways
mtha01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VSX76_00090
Enzymes [BR:
mtha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VSX76_00090
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WVI83788
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Position
unnamed:12521..14629
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AA seq
702 aa
AA seq
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MTSAQTASPRWAATEGLPFPLGSTRMEKEGAYNFALYSKHAQSITLLLYTESNIVDPIFE
YQFDYLKNKTGRVWHCRIPFAAMQGASYYAYSVKGPAPNGLLEWHTFDGDKILLDPYAKS
VFFPPTFDRLASTQPGSNAGKAPLGVLTGDSEPFDWQSDHCPRHEADAVIYELHVGGFTS
NPNSGFADQARGTFAGLVEKIPYLKDLGVTVVELMPVFQYDPADGNYWGYMPLNFFSPHH
DYLSDHAVKAQHNEVRDMIKALHQADIEVILDVVYNHTGEGDHTGPVYSYKGIDNSTYYL
MADRPDAPYENFSGTGNTLNTANRAVRKMIMDSVRHWAHEMHVDGFRFDLASLFTRNPDG
SVNANDVPLLSDMASDPTMAHLRLIAEPWDAAGLYQLGRAFPGIMACQWNGRYRDDLRRF
VKGDPGMVPALMRRLYGSDDLFPDDRMNAYHPHQSVNYLASHDGFTLYDLVAYNRKRNWA
NGHGNTDGMVENHSWNCGWEGDEGAPPEVVKLRKQQIRNFCCLLFLSNGTPMFRAGDEFM
HTQAGNNNPYNQDNVTGWIDWDRLHANPDMFRFFKLMIAFRKAHPSLARSRFWRGDVRWY
GTGSEPDFGYESRSLAFALHGGSQQDLDIYVMINAWWEELTFQIQEGAANVWRRVIDTSL
ESPFDFFEPGNESTIQFLQYRVPGRAIVVLVRDQDQGDRNEN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggcacagacagcatcaccccgatgggcggccaccgaagggctgccgtttccc
ctgggttcaacccggatggaaaaagagggcgcctacaactttgcgctatactcaaagcat
gcgcaaagcatcacgttgttgctctacaccgagagcaatatcgttgatcccatattcgaa
tatcagttcgattacctcaagaacaaaaccggcagggtctggcattgccgcatcccgttc
gcggcgatgcagggcgcgtcctactacgcgtacagtgtcaagggacccgcgcccaatggc
ctattagaatggcacacgtttgatggcgacaaaatcctgctcgacccctatgccaagtcc
gtgttctttcccccgactttcgaccggctcgcctccacccagccgggttcgaacgccggc
aaggcgcccctgggcgtgctgacgggcgacagcgagcccttcgactggcaaagcgaccac
tgtccccggcacgaggccgatgccgtcatctacgagttgcacgtcggaggcttcaccagc
aatcccaactctggcttcgctgatcaggcgcgcggcacgtttgcgggcctggtcgagaaa
atcccgtacctgaaggatctcggcgtcaccgtggtagaactgatgccggtgttccaatac
gaccctgccgacggcaactactggggctacatgccgctgaacttcttctccccccaccat
gactatctcagcgaccacgcagtcaaggcgcaacacaacgaggtgcgcgacatgatcaag
gcgctgcaccaggcggatatcgaggtgatcctcgacgtggtctacaatcacacgggggag
ggcgatcacacgggcccggtctatagctacaaagggatcgacaacagcacgtactatctg
atggcggaccgtccggacgcgccctatgaaaatttctccggcaccggcaacacgctcaat
acggcgaaccgcgccgtgcgcaagatgatcatggacagcgttcgccattgggcgcacgag
atgcatgtcgacggctttcgcttcgatctcgcttccctctttacccgaaacccggacggc
tccgttaatgccaacgacgtgccgctgctaagcgacatggcctctgaccctaccatggcg
cacctgcgtctgattgccgagccctgggacgccgccgggttgtatcaattgggccgggcg
tttccggggatcatggcgtgtcaatggaatggccggtatcgggacgatctgcgccgcttc
gtcaaaggagaccccggcatggtgccggccctgatgcgccgcctatacggcagcgacgat
ctgtttcctgatgaccggatgaatgcctatcacccccaccagagcgtcaactacctcgcc
tcgcacgacggcttcaccctttacgatctggttgcctataaccggaagcggaactgggcg
aatggccacggcaacacggatggtatggtggaaaaccatagttggaactgcggctgggaa
ggcgacgagggcgcgccgccggaggtcgtgaaactgcgcaagcaacagatcaggaatttc
tgctgcctgctgttcctttccaacggcacacccatgttccgcgccggcgacgagttcatg
cacactcaggccggaaacaacaatccctacaaccaggacaatgtaacgggttggatcgat
tgggaccggctgcacgcgaaccctgacatgttccgcttcttcaagttgatgatcgcgttt
cgcaaagcgcatccgtcgctggcgcggagccgattctggcgcggggatgtgcgttggtac
gggaccggcagtgagcccgactttggctacgaatcccgtagcctcgcctttgccctgcac
ggcggatcgcagcaggatctggacatctacgtgatgatcaacgcctggtgggaggaattg
accttccagattcaggagggggccgcgaacgtgtggcggcgcgtgatcgataccagcctc
gaaagcccgttcgactttttcgaacccggcaacgaaagcaccattcagttcctgcagtat
cgcgtgccgggccgggccattgtcgtgcttgtccgcgaccaggatcagggtgaccgcaat
gaaaattga
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