KEGG   Methylophaga thalassica: VSX76_02530
Entry
VSX76_02530       CDS       T09743                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
mtha  Methylophaga thalassica
Pathway
mtha02020  Two-component system
Brite
KEGG Orthology (KO) [BR:mtha00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VSX76_02530
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:mtha02022]
    VSX76_02530
Two-component system [BR:mtha02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   VSX76_02530
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat HTH_8 AAA_16 B12-binding UPF0175 VpsR PDE8A_N AAA_7 BRCA2DBD_OB2
Other DBs
NCBI-ProteinID: WVI85502
LinkDB
Position
1:177679..178953
AA seq 424 aa
MSNDKPLILVVDDEPDIRELIKDILEDENYEVRIAADGQEAQQIFNEQQPDLILLDIWMP
DIDGISLLKEFKQQNKNVTIVMMSGHGTIETAVEATRLGASDFIEKPLSTAKLLRGVEQA
LENRAKQASIQKELAQIPVGKSQQIKLLREQVERVAKHEMPILLVGEPGVGKHCFSHYLH
SLGQFSGGKFIELSPESFPLDSLKITSLAKNNCLYIHDLALLSDEAQALLLHLLETHKLQ
QCQLICATQYSLQKAVDNGDFLESLLYQLNSITLVVPPLRDHIEDIPELVHHFVDVQTTR
SGLPYRRFTVAAQNRLRNHEWSGNILELKNVIQRLLVLGNGEDIDVADVDLALASEAEAI
ENGDETINFELPLREAREQFERIYLLRKLQETDGNVGKAAKLAGMERTHLYRKLRSLGID
TKQI
NT seq 1275 nt   +upstreamnt  +downstreamnt
gtgagtaatgacaaacccctgattcttgttgttgatgatgagccggatattcgcgagcta
atcaaagacattctggaagacgaaaactatgaagtcagaattgctgctgatgggcaggaa
gcacaacaaatttttaacgaacaacagcctgatctgattctgctcgatatctggatgccg
gatatcgatggtattagtctgttaaaagaattcaaacaacaaaataaaaatgtcactatc
gtgatgatgtccggccatggcacgatagaaaccgccgtagaagcaacgcggctgggcgcc
agtgatttcattgagaaaccgctgtcgacggccaaacttctgcgcggtgttgagcaagcc
ctcgaaaatagagcaaaacaagccagcatacaaaaagaactggcacagattcctgtgggt
aaaagtcagcagataaaattattgcgtgaacaagttgaacgcgttgcgaaacacgaaatg
cctattctgctggtaggtgagcctggggtgggcaaacattgtttttcgcattatttacat
agcctgggtcaattctcaggcggtaaatttattgaattaagcccagaaagctttccatta
gatagcctgaagattacctcattagctaaaaataactgtttgtatatccatgacttggcc
ttgctgagtgatgaagctcaggcactgttattacacctgttggagactcataaattacag
cagtgtcagctgatttgcgctacacaatactccttacaaaaagccgtcgataacggtgac
tttctggagagcctgttgtatcaactcaatagcatcactctggtagtaccaccacttcgt
gatcatattgaagatattccagagcttgttcatcactttgttgacgtacaaaccacgcgt
tccggcttgccataccgtcgtttcactgttgccgcacaaaaccgcctcaggaaccatgaa
tggtctggcaatattcttgaattgaaaaatgtcatccaacgcttattagtactggggaat
ggtgaagatattgatgtcgcagatgtcgatcttgcactcgcctcagaagctgaagctatc
gaaaatggtgatgaaactattaactttgaattacctctgcgtgaagccagagaacaattc
gagcgcatttaccttttacgtaaattacaagaaacagacggcaatgtaggtaaagcggct
aaactggctggcatggaaagaacacatctttatcgaaagcttcgctctcttggtatagac
accaaacagatttag

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