Methylophaga thalassica: VSX76_03575
Help
Entry
VSX76_03575 CDS
T09743
Name
(GenBank) EAL domain-containing protein
Organism
mtha
Methylophaga thalassica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
NMT1
SBP_bac_3
PAS_9
PAS
PAS_8
PAS_4
PAS_3
Phosphonate-bd
NMT1_2
Lig_chan-Glu_bd
SBP_bac_11
PAS_13
Motif
Other DBs
NCBI-ProteinID:
WVI85699
LinkDB
All DBs
Position
1:complement(380200..384456)
Genome browser
AA seq
1418 aa
AA seq
DB search
MISHRFFCVCLLNLLLSLSLPSYAQLEATDEDLPLEKVSLQLKWKYQYQFAGYIAAVEKG
FYKEEGLDVELRPRQPDINVVNEVVSGKADYGIGGIGILAEYANGSPIKALAAIFQHDAL
VFMSRSESGIVSPYEMAGKRVMFDASNGNDAILRTLLNDAEIQLKDINIIPQKMGIDSLI
NNEVDVISGYISDQPYEFLQKKIPINIINPRNYGFDFYGDILFTSDDELKKYPGRAQRML
KASLKGWHYALEHSEEMINIIKQKYGAEQSLSRLRFEARETKKLILADLIPLGSIEPGRL
KRIADIYAQLGVAPALPEKTLNHFIHQPSTMLSLTEDEQAWLQAHPVIKVGVDKDFAPYE
WINKDGEYVGLAAEYINLLEERLGVKFDIISNRSWDELMTMAQNDEIDMLACLNETTERK
EYLTFTDPYIQNPVVIINTDINGYIGSLKNLAGKTVALEKGNFSNALLSDEYPEITLLFT
DTPRQALEKVARGEADAYIGDAAYANYQIKNSDLINLQFAGQTQARAAYRMGIVKNEPEL
LSIINKVLSQLSEQEKKEIESQWLGIKIDSGPQLKTLIQFGSGILLLFLLFSYWIYRLRQ
SRRALQESEGRLSDVLNTSPVPEIIIDNHGKITYLNQAFITSFGYDLSDIPTLDDWLLRT
FPKVETRERFITQADIAFNKQYVSFNFESIETDLICKDGQRRSVIANARKVTSDTIPDTL
IILYDITERKRAEEKLKLSGRVFTQAHEGILITDADGLIVDVNPAFSEITGYSREEILHQ
NPSILRSDKHDALYFEEMWNELRQQGHWQGEIWNKRKDGQLYAELLTISTLVDDYGETIH
YLGMFSDITQSKEQQHALEMMAHYDVLTQLPNRTLFADRFKQAIAHSNRNKSLLAVVFLD
LDGFKPVNDTYGHEAGDQLLIEVSARIQSCIRQDDTASRLGGDEFALLLNDVSSAEHCET
LINRIRHAIELPYHIDGNSISCSASIGITLYPLDNADADTLLRHADQAMYQAKVSGRQRH
HMFDTQQDEQMSEQQNQFKSIEDALISDHLVLFYQPKVNMRSGDIIGAEALIRWQHPERG
LITPAHFLPVVQGSYLEISIGNWVIERAIKQLNNWIERGWTMEMSINISSRHLQWQGLFD
HLDRVLAKYPNVPSYLIQLEVLESSVLTDINNISSIIETCRHTLGLKISLDDFGTGYSSL
THLRHLPVDTVKIDQSFVRDLIDDPNDYTIIDGVIGLTDAFHHQVIAEGVETTEHGMMLL
AMGCDLAQGYAIAYPMSADDCNQWFTDYQPNKQWIDLANRQLNAEQTLLELMTLQINYWL
NRVIANLESSPDTITHWPLMNHKKCHFSLWLEQAKKQNLFDRVWIESMKLAYTELYHNAN
SLKYQYQEDQHPINDAGIAELKDHFKTIELLLDAKKQQ
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgataagccatcgatttttttgtgtatgtcttcttaaccttttattgagcctgtcgcta
cccagctacgctcaactggaagctacagatgaagacttacccctggaaaaagtcagttta
caactgaaatggaaatatcaatatcagtttgctggctacattgctgccgtagaaaaagga
ttttataaagaggaaggcctggatgttgaattacgtcctcgtcaacctgacattaatgtt
gtcaatgaggtcgtcagcggaaaagcggattacggtatcggtggtatcgggatcctcgct
gaatacgcgaatggttcaccgataaaagccttagccgcgatattccagcatgatgcttta
gtctttatgtcacgctcagaatccggaattgtcagtccttatgaaatggctggaaagcgc
gtcatgtttgacgccagcaatggtaatgacgccatcttaagaaccctgctgaatgatgca
gaaatccagctgaaagatatcaatatcatccctcagaaaatgggcattgatagccttatc
aataatgaagtcgatgtcatttctggttacatcagcgatcaaccctatgagtttttgcag
aaaaaaatccctataaacatcatcaacccgcgtaattatggttttgatttttacggcgat
attttatttaccagcgatgacgaactgaaaaaatatccaggccgagcccaacgcatgctg
aaagcctcgttaaaaggctggcactatgcgctcgagcatagtgaagagatgattaatatc
atcaagcagaaatatggtgctgaacaaagcctgtcgcgacttaggtttgaagcaagagag
acaaaaaaactaatattggcggatctaataccgttaggcagtattgagcctggtcgcctg
aaacgcattgccgatatttatgcacagctgggggtcgcccctgctctgccagaaaaaacc
cttaatcacttcattcatcaacccagcaccatgttatctctcactgaagatgaacaggca
tggctacaggctcatcccgttattaaagtcggtgtagacaaagacttcgctccctatgag
tggatcaacaaggatggtgagtatgttggtctggctgctgaatatatcaatttgctggaa
gaacgattgggcgtgaaattcgacatcatctctaatcgaagctgggatgaactgatgact
atggctcaaaacgatgaaatcgacatgctggcctgtctgaatgaaaccaccgaacgtaag
gaatacttaacgtttaccgatccgtatattcaaaatcctgtggttatcattaatacggat
atcaatggctacattggttcattaaaaaatctggctggtaaaacagtcgcattagaaaaa
ggtaactttagtaacgcgctgctgagcgatgagtaccctgaaattactttgctgttcact
gacacacctcgacaagcattggaaaaagtagctagaggcgaggcagatgcttatatagga
gatgcagcctatgccaattatcaaataaaaaacagcgacctcattaatcttcaatttgcc
ggacaaacgcaagccagagcggcataccgcatgggtatagtcaaaaatgaaccagaacta
ttaagcatcataaataaagtgctgagtcagctatctgagcaagaaaagaaagaaattgag
tctcagtggctgggtattaaaatcgactccggaccacaactaaaaacactgatacagttt
ggttctggcatcctgctgttgtttctattgtttagctattggatttaccggctgcgccag
tcacgacgagcccttcaggaaagtgagggacgtttaagtgatgttttgaacacctcaccc
gtgccagaaatcattatcgataatcacggtaaaattacttaccttaatcaagcgtttatt
acctctttcggctatgatctcagcgatattccaacattagatgattggttactcaggacc
ttccccaaagtagaaactcgtgaacgatttatcacacaagctgatatcgcgtttaacaaa
caatacgtttctttcaattttgaatctattgaaaccgatctcatctgtaaagacgggcaa
cgacgctctgtcattgccaatgcccgtaaagtgaccagtgacacgataccagatacatta
attattctttacgatattactgagcgaaaacgtgcagaagaaaaattaaaactgtccggc
agggtctttacacaagcacacgagggaattctcatcaccgacgcggacggcctcatcgtc
gatgtaaacccggcattctctgagataacgggctacagcagggaagaaatattacatcag
aatccctcaatattacgttctgataaacatgacgccttatattttgaagagatgtggaat
gaactccgccagcaaggccactggcaaggcgagatatggaataaacgcaaagatggtcaa
ctctatgctgagttactcactatttctacattggtcgatgattatggtgagaccatacat
tatctcggcatgttctccgacattacccaaagcaaagagcaacagcatgccctggaaatg
atggcgcactatgatgtgctgacgcaattgcctaacagaacattatttgccgacaggttc
aagcaagccatcgcccatagtaatcgcaataagagtctgcttgctgtggtctttttagat
ttagatggtttcaaacctgttaatgatacctatggtcatgaagcaggggaccagttactg
attgaagtctcagcccgtattcaatcctgtatcaggcaagacgataccgcatctcgactc
ggtggtgatgaatttgctttattactcaatgatgtcagttcagcagagcactgtgaaaca
ctgataaatcgtatccgacatgctattgaacttccctatcatattgatggtaatagcatc
agttgcagtgcgagtattggcatcaccctttaccctctggacaatgctgatgccgacacc
ttgttacgccatgccgaccaggcaatgtatcaggcaaaagtatctggccgccaacgtcat
catatgtttgatacacaacaagacgagcaaatgtctgaacagcagaatcaatttaagtcg
atcgaagatgctttgatatcggatcaccttgtgctgttctaccaacccaaggtgaatatg
cgctcaggcgacatcattggcgctgaagcattaatccgctggcaacatcctgaacggggc
ttgatcacaccagctcactttttacctgttgttcaaggcagttatctggaaataagcata
ggaaactgggtcattgagcgcgccatcaaacagctaaacaactggattgaacgtggctgg
acaatggaaatgagcattaatatttcgtcacgtcatctgcaatggcaaggtttgtttgac
catctggaccgtgttctagccaagtatcccaatgtaccttcttatctcattcaattagaa
gttcttgaaagtagtgttttaaccgatattaacaatatctcttctatcatcgaaacctgc
cgccacacgcttggccttaagatttcactggatgattttggcaccggctattcctcactg
acacatttgcgtcatcttcctgtagataccgtcaagatagatcaaagttttgtacgtgat
ctgattgacgatcccaatgactatacgattattgatggcgttattggtctgacagacgct
ttccatcatcaggtcatcgctgaaggtgtagaaacaactgagcatggcatgatgttgctg
gcgatgggctgcgatttagcgcaaggttatgcgatcgcgtatccaatgtcggctgatgac
tgcaatcaatggttcactgattaccaaccaaataagcaatggatcgatctggctaatcgt
cagcttaatgcggaacagaccttactggaattaatgacgctgcagatcaattattggcta
aaccgtgtgattgccaatctagagtcgagtcctgacactattactcattggccactgatg
aatcataagaaatgtcacttcagtttatggctggagcaagccaagaaacagaatttgttt
gatagagtatggatagagtcgatgaaactggcttatacagagctttatcataatgccaat
agtctgaaatatcagtatcaggaagaccagcatcctattaatgatgctggtattgctgaa
ctgaaagaccactttaaaaccattgaattactgctggatgccaaaaaacagcaataa
DBGET
integrated database retrieval system
