Methylophaga thalassica: VSX76_03585
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Entry
VSX76_03585 CDS
T09743
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
VSX76_03585
Enzymes [BR:
mtha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VSX76_03585
Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VSX76_03585
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM3_NFP
BRCA-2_OB1
Motif
Other DBs
NCBI-ProteinID:
WVI85701
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Position
1:complement(385192..386772)
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AA seq
526 aa
AA seq
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MIRIALVSVFTLLVASCSSTPEKVAGASASPSVTYSKAKQKQKHTPWEQAYNESLEENEN
PLSSENPPITLPPQDPTDVWERIRNGFVISDYKTLEPDTERQLRWFIDHQDYVARVVERA
RPYLFYIVEEVKKRNMPMEVALLPVVESGFKPMAYSPSHAAGLWQFIPGTGELYGLEQNW
WYDGRRDVVKSTQAALDYLEKLHNDFGDWQLAFAAYNCGEGTVGRAIKKNQEQGKPTDFW
SLDLPKETSAYVPRLMAVSHMVKYPERYELELSPIDNKPFFGQVNVGSQIDLAMAAKMAG
ISEKQLHQLNPAFNRWATAPQGNHKLVLPLEKIPTFKTALAKMPASQRVQWARHEIKRGE
SLSIIARNYDTTVDVIKQANKLGTTQIRAGRNLLIPVASHDISKLALNKAQKSVSPENVK
KTTYVVKAGDTWWDIARKNNTDVKTLTQQNNKSAKDILRAGEKLVITSAAADIRKSVSYT
IKDGDSLWAISRKFNVSVADVKEWNGLSDRSTLQPGQSLKLYIDET
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgataagaatagcactcgtatcggtatttacgttacttgtcgcttcctgtagcagcacc
cccgaaaaagtcgcgggggcctcggcatcgccgtctgttacgtattctaaagcgaagcaa
aagcagaaacatactccctgggaacaagcatataacgaatccctagaagaaaacgaaaac
cctctatcctcagaaaacccaccaattacacttcctccccaagacccaaccgatgtttgg
gaacgcattcgaaacggctttgtcatctctgattataagacgcttgagccagatacagaa
cgtcaacttcgctggtttattgatcatcaggattatgtcgccagggtggtggaaagagct
agaccttacctgttttacattgttgaagaagtcaaaaaacgtaatatgccgatggaagtc
gccttattacctgttgtcgaaagtggctttaaacccatggcttattcgcccagccatgcg
gcagggttatggcagtttattccaggcactggtgaactttatggcctggagcagaactgg
tggtatgacggcagacgtgacgtagttaagtcaacacaagcggcacttgattatcttgaa
aaacttcataacgactttggtgactggcaactcgcttttgctgcttataattgtggtgaa
ggcacagtcggacgtgctattaaaaagaatcaggaacaaggtaaaccgactgatttttgg
tcgctcgatctccccaaagaaacgtctgcttacgtacctcgcttaatggctgtcagccac
atggtgaaataccctgaacgttacgaactagaattaagccctatcgataacaaaccgttc
tttggtcaggttaatgttggttcacagatcgatttagcgatggccgccaagatggcaggc
atcagcgaaaaacagctacaccaattaaacccggcatttaatcgctgggcaacagcacca
caaggcaaccataaattagtactgccgctggaaaaaattcctacttttaaaaccgcctta
gcaaaaatgcctgcttcacagcgagtgcaatgggcacgtcatgaaattaaacgtggtgaa
tctttaagtattattgccagaaactacgacaccacagtcgatgttataaaacaagccaat
aaactcggcacgactcaaatccgtgcaggaagaaatctactgattccggtcgcctcacat
gacatcagtaaattggctttgaataaagcacagaagagtgtgtcacctgagaatgtcaaa
aaaacgacttatgttgtgaaagcgggtgacacttggtgggatattgcccgaaaaaataac
accgatgtaaaaacgctgactcaacagaataataaatcggccaaagacatcctgcgtgca
ggcgaaaaacttgtcatcactagtgctgctgcagatatcagaaagtcggtcagttacact
atcaaagatggtgactcactctgggcaatctcacgtaagtttaatgtcagtgttgctgat
gtgaaagaatggaatggtctcagtgatcgctcaactttacagccaggtcagagcttaaaa
ctgtatatagacgaaacctga
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