Methylophaga thalassica: VSX76_04095
Help
Entry
VSX76_04095 CDS
T09743
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00300
Lysine biosynthesis
mtha00470
D-Amino acid metabolism
mtha01100
Metabolic pathways
mtha01110
Biosynthesis of secondary metabolites
mtha01120
Microbial metabolism in diverse environments
mtha01230
Biosynthesis of amino acids
Module
mtha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VSX76_04095 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSX76_04095 (dapF)
Enzymes [BR:
mtha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VSX76_04095 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WVI86816
LinkDB
All DBs
Position
1:493083..493931
Genome browser
AA seq
282 aa
AA seq
DB search
MLKFSKMHGLGNDFIVINAIQQKVELTTEQIRFMADRHFGIGCDQLLLVEKASSSDVDFR
YRIFNADGGEVSQCGNGARCFARYVRDYGLTTKDTIAVETASGIIYPTIQTDGLVSVDMG
KPVFAPEKVPFIAESEALTYLIDVPDYDKVEIASVSMGNPHAVMLVDNVDTAAVEKIGPA
MESHTRFPERVNVGFMQLVNSETIRLRVFERGSGETTACGTGACAAVVTGIRRGLLARDV
TVSLPGGQLHISWPDENASVWMTGPAEHVFDGEIAWSTLQQI
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaattcagcaaaatgcatggtttaggcaatgatttcattgtgattaatgccata
cagcaaaaagtagaactgaccactgagcagattcgttttatggcggataggcattttggt
atcggttgtgaccagcttttgctggttgaaaaagcatcatcatcagatgtggattttcgt
taccggatttttaatgcggatggtggtgaagtttcacaatgtggaaatggtgcgcgttgt
tttgctcgctatgtccgtgattatggtttaacaaccaaagataccattgctgtagagacc
gcttcaggcatcatttatccgacaatccagactgatggactggtcagcgttgatatgggt
aaacccgtttttgcaccggaaaaagtgccgtttattgctgaatcagaagcgcttacctac
ctgatcgatgtcccggattacgataaagtcgaaattgccagcgtctcaatgggtaatccg
cacgcagtgatgctggtggacaatgtcgacactgctgcggtagaaaaaataggtcctgcc
atggagtctcatacacgttttccagaacgtgtgaatgttggcttcatgcaacttgtgaac
tcagaaacgattcggttgcgtgtttttgagcgtggttcgggtgaaacgacagcttgtggt
acaggggcttgtgccgcagtcgtaacggggattcgccgaggattattagccagagatgtg
actgtctctttaccaggagggcagttgcacattagctggccagatgaaaatgcctctgta
tggatgaccggccctgcagagcatgtatttgacggagaaattgcgtggtcgacactacaa
cagatttaa
DBGET
integrated database retrieval system
