Methylophaga thalassica: VSX76_04305
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Entry
VSX76_04305 CDS
T09743
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mtha03110
]
VSX76_04305 (clpB)
Chaperones and folding catalysts [BR:
mtha03110
]
Heat shock proteins
HSP100
VSX76_04305 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
TniB
ATPase_2
nSTAND3
AAA_24
bpMoxR
AAA_7
IstB_IS21
RuvB_N
DUF815
NBD_SMAX1
AAA_25
ABC_tran
NACHT
AAA_19
YhdX
Motif
Other DBs
NCBI-ProteinID:
WVI85843
LinkDB
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Position
1:536654..539239
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AA seq
861 aa
AA seq
DB search
MQIDKLTSKFQEALAAAQSMAVGQEHQFIEPVHLMLALLQQQNGSVKPILAQSGVNVAAY
QADLDQQLSRLAQVEGGNGDIHVSQDLSRLLNQTDKLAQQRQDQYISSELFVLALAEDKN
QHGELLRKHGGNKTAINTAIDKIRGGERVTDPNAEEQRQALEKYTIDLTARAEAGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGMKNKRVLAL
DMGSLIAGAKFRGEFEERLKAVLNDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLK
PALARGELHCIGATTLNEYRQYVEKDAALERRFQKVIVGEPTVESTIAILRGLAERYEVH
HGVDITDPAIVAAATLSNRYITDRKLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLI
QLKIERMALKKQSDDASKKRLETLETEMKKLAREYTDLEEVWKSEKASLHGSQHVKEELE
KARLELDAANRSADYEKMAKLQYGRIPELEKQLKLATEAEMQEFTLLRNKVGEEEIAEVV
SKWTGIPVSKMLEGERDKLLKMDDALHETVIGQDEAVSSVANAIRRSRAGLSDPHRPNGS
FLFLGPTGVGKTELCKSLANFLFDTQDAMIRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL
GSSVIQEMAGEENYDAMKAAVMEIVSQHFRPEFINRVDDVVVFHPLQQAQIRAIAEIQLS
HLRARLAERDMKLMLSDEALDLIASEGFDPVYGARPLKRVIQHEIENPLAQDLLSGKFSA
GDTVNIEVEADKLVFKELKLH
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagataaattaaccagtaaattccaggaagcgctcgcggctgcccaaagtatg
gctgtggggcaagagcatcagttcatcgaacccgtgcatttaatgctggctttactgcaa
caacaaaatggcagtgtgaaacctattctggctcagagtggtgttaatgttgcggcttat
caagctgatttagaccagcaattatcacgactggctcaggttgaaggtggtaatggtgat
atccatgtttcacaagatttaagccgattattgaatcaaacggataagctggcacagcaa
cgtcaggatcaatatatttccagtgaactgtttgtattggcgctggcggaagataaaaac
caacatggtgaattacttcgcaaacatggcggtaacaaaacagcgattaataccgctatt
gataaaattcgtggaggggagcgagtgaccgatccaaacgcagaagagcaacgtcaggct
ctggaaaaatacacgattgatctaacggcaagagctgaagcgggcaaattagacccggtg
attggtcgtgatgatgaaattcgtcgtactattcaagtcttgcagcgtcgtaccaaaaat
aatcctgtccttatcggtgaacccggggtgggtaaaaccgcgattgttgaaggattggca
cagcgtatcgtcaatggcgaagtaccggatggtatgaaaaacaaacgggttttagcattg
gacatgggctcgttgattgccggtgccaaattccgtggtgagtttgaagaacgcttgaag
gcggttttgaatgatctatcgaaacaagaaggtcagatcattctgtttatcgatgaaatt
cataccatggtcggtgccggtaaggctgaaggtgcaatggatgccggtaatatgctcaaa
cctgcgctggcacgcggtgagcttcattgtatcggtgcgacaacgttaaatgagtatcgt
caatatgtagaaaaagatgctgcgctggaacgtcgtttccaaaaagtgattgtcggcgag
cctacggtggaatcgacgattgcgatcttacgtggtctggcagagcgttatgaagtgcat
catggggtggatattacggatccggcgattgttgccgcagcgacgttgtctaaccgttac
atcacagacagaaaactgcctgataaagcgattgatcttatcgatgaagcagcgagtcgc
attcgtatggaaattgactccaagccagaggtgctggatcggcttgagcgtcgtttgatt
caattaaaaattgaacgcatggcactgaaaaaacaaagtgatgatgcttccaaaaaacgg
cttgaaacgctcgaaactgagatgaaaaaactggccagagaatataccgatctggaagag
gtctggaagtctgagaaagcgtcgttacatggcagtcagcacgtgaaagaagagctggaa
aaagcgcgtctggaactggatgctgccaatcgtagtgccgattatgaaaaaatggccaaa
ctacagtatggacgtattccagagttggaaaaacagttgaaactggcaacagaagccgaa
atgcaggaattcactttactgcgtaataaagtcggtgaagaagaaattgctgaagttgtc
tctaaatggacgggtatccctgtatcaaaaatgctggaaggtgagcgtgacaaactgctg
aaaatggacgacgccttacacgaaaccgttattggtcaggatgaagcagtgagctcagtc
gctaatgcgattcgtcgaagccgggcaggcttgtctgatcctcaccgtcctaatggatca
ttcttgtttttagggccaaccggggtcggtaaaacggagttgtgtaaatctctggctaac
ttcttgtttgatacacaggatgcgatgattcgcattgatatgtcagagtttatggaaaaa
cactcggttgcacgtctggtaggtgcgccgcctggctacgtgggttacgaggaaggtggc
tatctgacagaagcagtcagacgcaaaccttattcagtgattttgttagacgaagtggaa
aaagcccatccggatgtctttaatattctgcttcaggtactggatgatggccgtttgacg
gatggacaagggcgtactgtggatttccgtaatacggtgattgtgatgacatcgaacttg
ggatcgagtgttattcaggaaatggcgggtgaagaaaattatgacgcgatgaaagccgcg
gtgatggagattgtgtcacagcattttcgtccggagtttattaaccgtgtggatgatgtg
gtggtgttccatccattacaacaagcacaaatccgtgcgattgccgagattcagttatca
catctgcgagcaagattagcagagcgagatatgaaactgatgttatccgatgaggcattg
gacttgattgcctcggaaggctttgaccctgtgtatggggcaagaccgctgaaacgggtg
attcagcatgagattgaaaatccactggcgcaggatttattgtcaggtaagttttccgcg
ggtgacactgtcaacattgaagttgaagcggataagctggttttcaaagagctcaaactt
cactaa
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