Methylophaga thalassica: VSX76_04370
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Entry
VSX76_04370 CDS
T09743
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtha03000
]
VSX76_04370 (slmA)
03036 Chromosome and associated proteins [BR:
mtha03036
]
VSX76_04370 (slmA)
Transcription factors [BR:
mtha03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VSX76_04370 (slmA)
Chromosome and associated proteins [BR:
mtha03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
VSX76_04370 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_13_2
HTH_20
TetR_C_15
HTH_11
GCP_C_terminal
HTH_22
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WVI85856
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Position
1:553005..553622
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AA seq
205 aa
AA seq
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MTEAVPTSRAETKRSRRQDILEALASELEQRPGERITTAKLAASLGVSEAALYRHFPSKA
RMFEGLIGFAEETVFGLIQRILQDEQNALNRIEKIMTLMLGFSTKNPGITSVLMGTALTG
ETERLRQRVSQFFDRLETQFRQILRERELTLTQAGGRPVNETANLLLAVVEGQMQQYVRS
SYRQSPLIGWEQKWQLLTKMLEVYA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcagtaccaaccagtagagctgaaaccaaacgttcacgtcgtcaggatatt
ctagaagcacttgcttctgagttagaacagagaccgggagaacggattacaaccgccaaa
cttgctgcaagcttaggagtatcagaagctgctttgtacaggcattttccgagcaaagcg
agaatgtttgaaggtttaattggttttgctgaagaaacagtttttggtctgattcaacga
attttacaagatgagcaaaatgcgttgaatcggattgaaaaaattatgacgcttatgctt
ggcttttctacaaaaaatccaggaattactagtgttctaatgggaacggctttaactggt
gagacagaacgtttaagacaacgcgtgagtcaattttttgaccgtctggaaacgcaattc
agacagatcttgagagagcgtgagctgactttgacacaggccggaggtcgacctgtcaat
gaaactgcgaatttactactcgctgttgttgaggggcaaatgcaacaatacgtcagaagt
agctacagacaatctcctctgattggctgggaacaaaagtggcagttattaacaaaaatg
cttgaggtttatgcatga
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