Methylophaga thalassica: VSX76_05335
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Entry
VSX76_05335 CDS
T09743
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00470
D-Amino acid metabolism
mtha00550
Peptidoglycan biosynthesis
mtha01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSX76_05335 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSX76_05335 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
VSX76_05335 (murD)
Enzymes [BR:
mtha01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VSX76_05335 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
Precursor biosynthesis
Amino acid ligase
VSX76_05335 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
DAO
Pyr_redox_2
Thi4
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WVI86035
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All DBs
Position
1:733907..735250
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AA seq
447 aa
AA seq
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MNSLSHKNCLIIGLGQTGLSCARFLANRALGIAIMDTRENPPSVQEVKNEYPQVLIKTGG
LDQDWLLKADLIVLSPGIDPRLPEIEIARQAGIEIVGDIELFARYADAPVVAITGSNGKS
TVTTLLALMAQVSGKIVRAGGNLGTPALDLLEESAPDFYILELSSFQLETVRSLNAFAAV
VLNVSPDHMDRYDSLEAYQRAKQTIFNGDGVMVINQDDPIVNDMRQSGRNTIGFSLKQSH
GVDFGLMEADGQTWLAEGEYPLLPVEQMKIVGSHNIANALAALALGSAMALPMSSMLSAL
REYKGLPHRCRLVRQLNGIRWFNDSKATNVGACVAAINGLAGSGNIILIAGGVGKDQDFS
ELTSALKQSVKAVVLMGVDADKIAKVIPPGVEQIQASDMADAVKIAQSIASEGDNVLLSP
ACASFDMFSSYADRGNSFEQAVREIAA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtctttcacataaaaattgcctgattatcggtctgggtcagacgggactttcg
tgcgcgcgatttttagccaacagagctttgggtattgccatcatggatacgcgtgagaat
ccaccgtctgtgcaggaggtgaaaaatgagtatccacaagtattaattaaaacgggtggg
ctggatcaggattggttattaaaagcggatcttattgttctgagcccagggattgatcca
cgtttacctgaaattgaaatcgcacgtcaggcggggattgagattgtcggtgatatagag
ctgtttgcccgttatgctgatgcgcctgttgtagccataacgggttccaatggtaaaagc
accgtcaccaccttacttgctttgatggctcaggtgtcgggaaaaatagtacgtgccggt
ggtaatttaggtacgccagcattagatctgctggaagagtctgcacctgatttttatatt
ctggagctatcaagtttccaattagaaacggtacgttccttaaatgcgtttgcggctgtg
gtacttaatgtcagtcctgatcacatggatcgttatgattcgctggaagcatatcagcgg
gcgaaacaaaccatctttaatggtgatggcgtcatggtcattaatcaggatgaccccatt
gttaatgacatgcgtcaatctggccgaaatactatcggattcagtttgaaacaatcccat
ggggtggatttcggtttaatggaagctgacgggcaaacctggttagcggaaggtgaatat
ccgttactgccggttgagcaaatgaaaattgtcggttcacataatatcgctaatgcgttg
gctgccttagcacttggctcagccatggccttacccatgtcgtccatgttatcggcttta
cgtgaatataaaggtctgccacaccgttgccgattagtcagacagctcaatggtattcgt
tggtttaatgattctaaagcaaccaatgtgggtgcctgtgtggcagccattaatgggctt
gccggatcaggcaatattattctgattgctggtggtgtaggtaaagatcaggacttttca
gagctgacgtcagccttaaaacagtcggttaaagccgtggtgttgatgggggttgatgcc
gataagattgcaaaagtgattccgcctggtgttgagcaaattcaagcaagcgacatggct
gatgcagtaaaaatcgcacagtcgatcgccagtgagggtgacaatgttctgctttcaccg
gcttgtgccagctttgatatgttcagcagttatgccgaccgtggcaattcatttgaacaa
gccgtcagggagattgcagcatga
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