Methylophaga thalassica: VSX76_06545
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Entry
VSX76_06545 CDS
T09743
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtha03016
]
VSX76_06545 (truB)
Enzymes [BR:
mtha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VSX76_06545 (truB)
Transfer RNA biogenesis [BR:
mtha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VSX76_06545 (truB)
Prokaryotic type
VSX76_06545 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
ARPC4
Motif
Other DBs
NCBI-ProteinID:
WVI86267
LinkDB
All DBs
Position
1:966705..967631
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AA seq
308 aa
AA seq
DB search
MARRHKKGRDITGIVIIDKPTGHSSNHILQRVKRLFDAKKAGHTGSLDPLATGVLPVCLG
DATKLSSYLLDADKQYLVTCQLGIVTDSGDSDGNVINEMPVPEFNEDTLSQVTQQFLGEI
EQVPPMFSALKHQGQPLYKLARQGIDVERKARRIFIYAIDIIDCQSDRFTLSVRCSKGTY
IRTLVEDISHALGTGGHVIMLRRTAVAGYDLSEAITVETLQEMADKDGFVTLDASLQQAE
DALPDWPAIVLDEEGTKSIGFGQSVTVQTPFKSANVRLFNMNNQFLGLGEMSAEGVVAPK
RLFANAVS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgacataaaaaaggccgggatatcaccggtattgtgatcattgataaacct
actggtcacagttcaaatcatattcttcaacgcgttaaacgactgtttgatgcaaaaaaa
gcaggtcatacagggagtcttgatccgctagcaacaggtgttttgccggtctgcctgggc
gatgctaccaaattatccagttatttattggatgctgataaacagtatctggtgacttgc
caattaggcattgtcactgacagtggtgattcggatggcaatgtcatcaatgaaatgcct
gtgccagaatttaacgaagacacattaagccaggtcacccagcaatttctaggcgaaatc
gaacaggttccgcccatgttttctgctctaaaacatcagggccagccgttatacaagttg
gcaagacaaggtattgatgttgagcgaaaagcgcgccgcatttttatctatgctatcgat
ataatcgattgccagtctgatcgcttcaccttatccgtacgctgtagcaaaggtacttat
attcgtaccttagttgaagatattagccatgctttaggaaccggtgggcatgtcatcatg
ttaagaagaacagcggtagcaggctatgatttatcagaagcgataaccgttgaaaccttg
caggaaatggccgacaaagatggttttgtaacattagatgccagcttgcagcaggctgaa
gatgctttacctgactggcctgcaattgtgcttgatgaagagggcacaaaaagtatcggt
tttgggcaatcggtcactgtgcaaacaccctttaaaagcgcaaatgtcagattatttaat
atgaataatcaatttcttggcctaggtgagatgtcagcagagggagtagtagcaccgaag
cgattattcgcgaatgcggtgtcttaa
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