Methylophaga thalassica: VSX76_06935
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Entry
VSX76_06935 CDS
T09743
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
mtha
Methylophaga thalassica
Pathway
mtha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VSX76_06935 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtha03400
]
VSX76_06935 (recO)
DNA repair and recombination proteins [BR:
mtha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VSX76_06935 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VSX76_06935 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WVI86344
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All DBs
Position
1:1056997..1057710
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AA seq
237 aa
AA seq
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MELTSAFILHHRPYRETSSLVDVLTRDHGRVSLVARGLRQTKKRSSPIQIFQPVWLSWYG
RGDLVTLSQIEKDEPGYRLLGNASLCGLYMNELLVKLLPVHEAEPDIFDAYRQALSSLQQ
KNNEQITLRLFEKALLSHLGYGLALTVDAESGEAIEEDGIYIYYPDSGPRRVFGQRLQNT
VSGRSLRHLEQEAGFDELSLKEIKHMMRSVINYYLGGRPLHSRQLFAGLNQFNTKTN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggagctgacatcagcctttattctacatcacagaccgtatcgggaaaccagttcactg
gtcgatgtgttaacccgtgatcatggtcgtgtaagtctggtggcccgggggctcaggcag
acaaaaaaacggtcatcaccgatacagatattccagccagtatggttaagctggtatggc
cggggtgacttagtgaccttaagtcagatagaaaaagatgagcccggttatcgtttgctc
ggaaatgccagtttgtgcgggctttatatgaatgagttattggtgaaattactccctgtt
catgaagctgagccagacatttttgatgcctatcgccaggctctctcttcgctccagcaa
aagaataatgagcagattacactgcgtttatttgaaaaagccttactgagtcatctgggt
tatggcttggccttaacggtggatgccgagtcgggagaagcgattgaagaggatggtatt
tatatctactaccctgacagcggtcctcgacgtgtattcggtcagcgtctgcaaaatacg
gtatcaggacgaagtctgcgtcatctcgaacaagaagccgggtttgatgagcttagcctg
aaagaaatcaaacatatgatgcggtcagtgataaattattatctgggcggccggccttta
catagccgtcagttatttgctggtcttaatcaatttaatacaaaaacaaactga
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