Methylophaga thalassica: VSX76_07175
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Entry
VSX76_07175 CDS
T09743
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
mtha
Methylophaga thalassica
Pathway
mtha02010
ABC transporters
mtha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSX76_07175
03070 Bacterial secretion system
VSX76_07175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_07175
02044 Secretion system [BR:
mtha02044
]
VSX76_07175
Transporters [BR:
mtha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VSX76_07175
Secretion system [BR:
mtha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
VSX76_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
MeaB
ABC_ATPase
AAA_29
AAA_30
AAA_16
DUF87
NB-ARC
nSTAND3
AAA_18
PRK
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WVI86391
LinkDB
All DBs
Position
1:1109915..1112110
Genome browser
AA seq
731 aa
AA seq
DB search
MDTGLNTLVALARFHQLPAESEQLSHEYGQPGEHFTDTQILQAAKALTLKAKKLSLSFSE
LNNGLLPAIAKAKDGSYFILAKVSEKSQQDDNVSTSGVLIQDLRDKAPKTLTRFELEVLW
SGEVIALTRRQGLGDSLQQAFDISWFIPSLVKYRKLFSEVIIASFFLQLFALVTPLFFQV
VMDKVLVHRGFTTLDVLAVGFFVVVVFESLLGGIRNYIFSHTTNRVDVELGSRLFHHLMS
LPLAYFESRQVGQNVARVRELDTIRNFITGTALTLLIDLFFVFVFLAVMWYYSPTLTWIV
LATIPCYVILSIFITPILRKRLDEKFKHGAANTAFLTESITGIGTVKSMAVEPQMRRKLE
DHLSSYVHSSFKSQNLNNVANQVAGLINKLMTLGIIWVGAHLVMDNKLTVGQLIAFNMLA
GRVSGPILKLVQLWQDFQQAGISIKRLGDILNTPREPGFNPNRSRLPTLQGAVTIEHVRF
RYCNDGPTILDDISLQVKPGEVIGIVGRSGSGKSTITKLVQRLYIPEGGRVLIDGVDLSV
VDTVWLRKQIGVVLQENFLFNRTIRENIALSDPSIPMERVIQAAKMAGAHEFIVDLPEGY
DNLVGEQGSNLSGGQRQRLAIARALINNPRILIFDEATSALDYESERLVQDNMAKICQGR
TVFIIAHRLTTVRQCHRIIVMDKGRIVEQGNHDALIAQNGYYAKLHSYQSHTPNLHPVTS
QKTTKAEGFAS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatactggactcaacacattagtggccctcgcccgctttcaccagcttcctgctgag
tctgagcagctttcacatgagtatggacagcctggagagcactttactgatacccaaata
ctccaagcagctaaagcactaacgttaaaagctaaaaaactttcactgtctttttctgag
ctcaataacggcttattaccggctattgcaaaagcaaaagatggcagttatttcattctc
gccaaggtctcagaaaaaagccaacaagacgataatgtatccacgtcaggtgtgcttatt
caggatttacgtgataaggcgcctaagacgttaacgcgatttgaacttgaggtcttatgg
tctggggaagtgatagccctcacccgacgacaaggcttgggtgatagtcttcaacaagcc
tttgatatctcctggttcattccttctctggttaaataccgaaaacttttctccgaagtc
attatagcctccttctttttacaactctttgccttagtaacccccttatttttccaagtt
gtgatggataaagtcttggtccatcgtggctttacaaccttagatgtcctagccgtaggt
ttctttgtcgttgtagtgtttgagtcactattgggcggtattcgtaattatattttcagt
cataccactaaccgagtggatgtcgagctcggctcacgactatttcatcatttgatgtca
ctgcctttagcctattttgagtctcggcaggtagggcaaaatgtggctcgggtcagggag
ctcgatacgattcgtaattttattacggggacagctctaaccttacttatcgatttgttt
tttgttttcgtttttctcgctgtaatgtggtactacagcccaacgctcacatggatagtg
ctggccaccattccttgttatgtcattctttcaatctttattacgccaattttacgtaaa
aggctggatgaaaaatttaaacatggcgcagccaatactgcttttctaaccgagtccatc
actgggattgggactgtaaagtctatggctgttgagccacaaatgcggcgtaaactagaa
gatcacctttcaagttatgtgcattcctcttttaaaagtcagaaccttaataacgtcgcg
aatcaggtagcgggtcttattaataagttgatgaccctaggtattatctgggtgggcgcc
catctcgttatggacaataaattaacggtggggcagttaattgcctttaatatgttggct
ggacgcgtcagtggcccgatattaaagctggtgcaactttggcaagacttccaacaagcc
ggtatttcaattaaacggttgggcgatattcttaacacgccaagagagccaggctttaac
cccaatcgttcacgtcttcctactctgcaaggtgcagtcacaatagagcatgttcgtttt
cgttactgtaatgatgggcctaccattttggatgatattagcttacaggtgaaacctggc
gaagtgattggtatcgtgggtcgaagcggcagtggtaagagcacgattaccaaactggtg
cagcgcctatatatcccagaaggtggcagggtattgatagatggtgtggatttgtccgtg
gttgataccgtttggctacgcaaacaaattggcgttgtgcttcaggaaaactttctattt
aaccgaaccattcgtgaaaatattgccttaagtgacccgtccattcccatggaacgggtt
atccaagcggcaaaaatggctggagcacatgagtttatcgttgatttaccagaaggctat
gacaacttagtcggtgaacaaggcagcaatctatctggtggtcagcgtcaacggctggcc
attgccagagccttaatcaataacccaagaatacttatctttgatgaagccaccagcgcc
ttagattatgaatctgaacgattagtacaagataacatggcaaaaatttgccaaggacgt
accgtttttattattgctcatagattaacgaccgtgaggcaatgtcatcgcattattgtg
atggataaaggccgtatcgttgaacaagggaatcatgatgccctgattgctcaaaatggt
tattatgcaaaattgcatagctatcagagtcatactcctaacttacacccggttacttct
caaaaaacgacaaaagcagaaggctttgcctcatga
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