Methylophaga thalassica: VSX76_07795
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Entry
VSX76_07795 CDS
T09743
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtha03016
]
VSX76_07795 (truD)
Enzymes [BR:
mtha01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VSX76_07795 (truD)
Transfer RNA biogenesis [BR:
mtha03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VSX76_07795 (truD)
Prokaryotic type
VSX76_07795 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WVI86507
LinkDB
All DBs
Position
1:1241421..1242500
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AA seq
359 aa
AA seq
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MTLSAFDFESLARVNSAVLSHLCRIRQTPEDFKVEEKLPFEPAGSGPHVMLQITKTDTNT
DWLAKQLAQFAGVEEVAIGYAGLKDRHAVTTQWFSVNTEGVAEPDWSAFESDLIKINLIT
RHNKKLKRGALSGNSFKLNLEVLDGDRDSWESALSQIQKQGVPNYFGEQRFGYQMGNLHG
VEQWFEQGRKPKSRNKKSLYLSAARSWLFNLVVSERVKAQNWNQFIPGDVMQLNGNHSCF
QSENDDTELFERLKTFDIHPTGALAGQGELQSHDECKQLETAVLDAWQAWVQGLSRQGLK
QERRALRLVPTEFNWQWHNSRLQLTFFLPSGCFATAVLRELAVVEDSSERIIQADRESV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacattgtcagcatttgattttgagtcattagcccgagtcaattcggccgtcttgagt
cacctttgccgtattcgccaaacgcctgaagattttaaggtggaagaaaaactgcctttc
gaaccggcagggtctgggccacatgtgatgttacagatcaccaaaacggataccaatact
gattggctggcgaaacaactggcacaatttgcaggtgtcgaagaggtggccataggttat
gcagggctaaaagatcgccatgcggtgacgacgcagtggtttagtgtgaataccgagggt
gtggctgaacctgattggtctgcctttgagtcggatctgataaaaattaaccttattaca
cgccataataagaagttaaaacgaggcgctttgtctggcaatagctttaagctaaatctt
gaagtacttgatggcgacagagatagctgggaatcggcactcagtcagatacaaaagcaa
ggcgtacctaattattttggtgaacagcgctttggttatcagatgggcaatttacatggt
gttgagcagtggtttgagcagggtagaaaacctaaaagccgtaataaaaaaagtctgtat
ctttctgctgcacggtcatggttgtttaatcttgttgtcagcgagcgagtaaaagcacaa
aactggaatcaatttattccgggtgatgtgatgcagttaaatggcaaccacagttgtttt
cagtcagaaaatgatgatactgagttatttgagcgcctgaaaacctttgatattcaccct
acaggggcacttgcagggcagggagaacttcagagtcatgatgaatgcaagcagctggaa
acagccgtgcttgacgcatggcaggcttgggttcagggattatcaaggcagggcctgaaa
caggagcgacgggctttacgtctggtgccgacagaatttaactggcagtggcataactca
cgtttacaactcacattctttttaccttcgggctgttttgcgacagccgttttgagagaa
ctggctgttgttgaagatagcagtgagagaattattcaggctgacagagagtcagtatag
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