Methylophaga thalassica: VSX76_07985
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Entry
VSX76_07985 CDS
T09743
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mtha
Methylophaga thalassica
Pathway
mtha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSX76_07985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_07985
Transporters [BR:
mtha02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSX76_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVI86540
LinkDB
All DBs
Position
1:1279496..1281646
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AA seq
716 aa
AA seq
DB search
MRLKYWLLSSVLFLVTACDMKAINSPYPEASSDESILYSAFSLRPKHLDPARSYSANEAI
ITGQVYEPPYQYHYLKRPYQLEPLSASAMPEVVYLDKEDNPVNANAENIAFSVYSIPIKH
DILYQPHPAFVKDENGNWLYHHLTDEQIANLEDLADFEKTGTRQLVAADFVYQIKRLAHP
EVHSPILGVMAEHIVGLKEYAEQLRAIRKEQGEVDLRQHEISGVKTIDDYHYQIKVYGKY
PQLDYWLAMPFFAPIPWEAEEFYSQPGLINKNITLDWYPVGTGPFYMTENDPNRRMVLTK
NPNFHGERYPAEGEDTDKQNGLLDDAGKPLPMIDKIVFTLEKENTSYWGKFMQGYYDVSG
ISSDSFEQAVNISTSGEFGLSDEMKAKGIKLETAIAATSFYTGFNMLDPVVGGYSERARK
LRQAISIAIDQEEYISIFANGRGIPAQGPIPPGIFGYSEAKAGINPYMYTWKNGQAERKS
IEAAKQLLAEAGYPNGRDKKTGEPLVIYMDITASGPDSKSDLDWMRKQFRKLKIQLVLRS
SDYNRFQDKIRRGQVQMFQWGWNADYPDPENFLFLLYGPNGRAQFGGENTANYQNKDFDK
LFEKMRTMSNTPERLAIIKQMVDIVRKDTPWIWGFHPKQFSLYHEWNHNVKPNLMANNTL
KYRRIDTGVREKLQSQWNQPILWPLGIVIIVIMLMVMPAVFIYRSKKYKKHHFPST
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaaatattggttgcttagtagcgtgctgttcttagtaacagcatgtgatatg
aaagcgataaactcaccttatccagaagcatccagtgatgaatctattctctacagcgct
ttttcacttcgccctaaacatttagatcccgcccgttcttacagcgcgaatgaagctatc
ataactggtcaggtatacgagccaccttatcagtatcattatttaaaaagaccctatcaa
ctcgagccattgtcggcctcagcgatgccggaagtggtttatttggataaggaagataac
ccggttaatgccaatgccgagaatattgccttttctgtctatagcatccctatcaaacac
gatattctctatcagcctcaccctgcgtttgtaaaagatgagaatggaaactggctttac
catcatttaacagacgaacaaatcgccaatttagaagatttagcggactttgaaaaaaca
ggtacacggcagctggttgccgctgattttgtctaccagataaaacgtctggcacaccct
gaagtccattctccaatccttggagtgatggcggagcatatcgttgggcttaaagagtac
gctgagcagttaagagccattcgaaaagagcagggtgaagtcgaccttcgtcagcatgaa
atcagtggtgtaaagaccattgatgattatcactatcagataaaagtatacggaaaatat
ccacaactggattactggttagcaatgcctttttttgcacctatcccatgggaagcggaa
gaattctactcccagccagggctgattaataaaaatatcactctagattggtaccctgtt
ggaactggtccgttttacatgactgagaatgatccgaacagacgtatggtgttgactaaa
aatcctaactttcacggtgaacgctatccagcagaaggggaagacacggataagcaaaat
ggcttattagacgatgcgggtaaaccgttgcccatgatagacaaaattgtttttactctc
gaaaaagaaaatacgtcttactggggaaaattcatgcagggctactatgatgttagtggc
ataagttcagatagtttcgagcaagcggtgaatatttcaacatcgggcgaatttggttta
agtgatgaaatgaaagccaaaggaataaaactggaaacagccattgctgcgactagtttt
tataccggatttaacatgttagatcctgtcgttggcggatatagtgagcgagccagaaaa
cttcgacaagcgatttctatcgccatagatcaggaagaatatatttctatatttgctaat
ggccgcggcatccctgcacagggacctattcctccaggtatttttggctacagtgaagct
aaagcgggtatcaatccctatatgtatacatggaagaatggtcaagctgaacgtaaatcc
atagaagcagcaaaacaacttctagcggaagctggatatccaaatggcagggataaaaaa
acaggtgagccacttgtcatttacatggatatcaccgcgagtggtcctgacagcaaatcg
gatttggactggatgcgtaagcagtttagaaagctgaaaatacagctggttctccgcagc
agtgactacaatcgttttcaggataaaatccgccgcggacaggtacagatgttccaatgg
ggctggaatgccgattatcccgatccagaaaatttcctgtttttactttatggtccaaat
ggtcgtgctcagtttggtggtgaaaacacagcaaattatcaaaataaagactttgacaaa
ctttttgaaaagatgcgcaccatgtcaaacacaccagagcgattggctataatcaaacag
atggttgatattgtcaggaaagatacgccctggatatggggctttcatcctaaacagttc
tcgctttatcacgagtggaatcataatgttaagcctaatttaatggctaataacacgctc
aaataccgacgtatcgatacgggtgtgcgtgaaaaacttcagtctcaatggaatcagccg
atactctggccattggggattgtaataattgtgattatgctgatggtcatgcccgcggtt
tttatttaccgttcgaagaagtataaaaagcatcattttccatcgacatag
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