Methylophaga thalassica: VSX76_09230
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Entry
VSX76_09230 CDS
T09743
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtha03000
]
VSX76_09230
Transcription factors [BR:
mtha03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VSX76_09230
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_5
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
WVI83957
LinkDB
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Position
1:complement(1556317..1557201)
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AA seq
294 aa
AA seq
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MAKINYHHLYYFWRVALSGSITKTADECHVSQSALSQQIKQLETSMDVRLFERAGRQLLL
TDVGRKVLSYADEIFTTGEELQSFINKGGTATQKHINIGVLTTLSRNFTESFISPLLKQP
NVSFTLTTRGMTNLLNGLTSHELDLVLTNRSVSQQNDDAIWQSQLVSRQSVSIIGPAQQN
PNNTFPQGYENLKWVLPTKITEIRSAFDAYCATLGYEPDIIAEADDMAMLRLLVRDTGAI
TALPAVVVKDEISSGNLSEYQVLPNVYEHFYAITIKRTFVPEIVTDLLQKNIVD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatcaactatcatcatctctattatttctggcgtgttgctctgtctgggagt
atcacaaaaacagctgatgaatgccacgtttcacagtcagctttatcacaacaaatcaaa
caactcgaaacatcgatggatgtcagattatttgaacgcgctggcagacaactgttatta
accgatgtgggcagaaaagttctaagctatgcagatgagatatttaccaccggtgaagaa
ttacaatcctttattaataaaggaggaacagccacacaaaaacacatcaatattggtgtg
ctcaccaccttatcgcgaaactttaccgaaagctttatcagcccgctgctcaaacagccc
aatgtcagcttcacactcaccactcggggtatgactaatttactgaatggcctgaccagt
catgaactggatcttgtgctgaccaatcgttccgtcagccaacagaatgatgatgcgata
tggcaaagtcagttagtatcgaggcaatcagtatcgattattggaccagcacaacaaaat
cccaataacacctttccacaaggttatgaaaatctgaaatgggttctgcccaccaagatt
acagaaatacgctcagcttttgatgcctactgtgcaacactgggttatgagcccgatatt
attgccgaggctgatgatatggcgatgttacgacttttggtgcgtgataccggcgccatc
accgccctgcccgccgtggtcgtcaaagatgaaatatccagtggcaacttatcagagtac
caagtgttacccaatgtctatgaacacttttatgccatcaccattaaacggacttttgtg
cctgaaattgtgaccgacctgcttcaaaagaatattgtcgattaa
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