KEGG   Methylophaga thalassica: VSX76_10215
Entry
VSX76_10215       CDS       T09743                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mtha  Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:mtha00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mtha02048]
    VSX76_10215
Enzymes [BR:mtha01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VSX76_10215
Prokaryotic defense system [BR:mtha02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VSX76_10215
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 HSDR_N Helicase_C DUF6942 AAA_34 HSDR_N_2 DUF6577 AAA_19 Vhr1
Other DBs
NCBI-ProteinID: WVI84149
LinkDB
Position
1:1773421..1776870
AA seq 1149 aa
MSNFQFLQRDFPALYADAVEAEQFTFSSPKASAIFCRSSLENAINWLYDHERTLTRPWRA
DLSTLMHEHSFKSLFNNTLFNELNLIRKTGNLAAHGKSVSQQEALASLKYLFRFMRHLAI
YYGKSVPDTLIFDEALIPRADADTGQPPSIETTLAEVDAKNQLERESEQQTRDRAQHNPD
IKQAIEQEQQQLAERKASREQSVDINTAIPLLVSEAETRLRYIDLSLKEAGWDNLQEGYH
LEYEVTGMPISTNKSGIGYIDYVLWGDDGLPLAIVEAKKTMHDARKGKHQAELYANCLEK
MKGQRPIIFYSNGFETYLWDDTFYPEREVQGFYTKDGLQLLIERRQTRKDLRLFKPNEAI
VGRPYQLEAITRVAENTVTENSQGELKGRARQSLLVMATGSGKTRTAAAIVDMLTKCNWA
KRVLFLADRNALVTQAKKAFNIHLPHLTAIDLTKEKEDNGTRLVFSTYPTIMNRIDGLRG
TDNRFYGVGHFDLIIVDEAHRSVYQKYKSIFAYFDALLIGLTATPKAEVDHNTYGLFGIE
DNNPTFAYELNQAVADKFLVPPKAMSVPLKFMREGVHYNQLSAAEKAEYEEKFGDPTQGE
APDEIESAALNKWLFNTDTVDKVLHHVMKSGIKVQGDEKLGKSIIFAKSHAHALFIEERF
NKNYPEYSGKFLRVIDNYESKAQSLLETFADEYEEHDPQIAVSVDMMDTGVDAPRVVNLV
FFKTVKSATKFWQMIGRGTRLCPDLFGPGLDKTEFYIFDYCQNYEYFDITPDGLQGKIVK
SLIQQVFEAKLEVAMLIRDDISRTEEQGPLAESYIKELHQAISNLDRNRFVVKAKLRYVV
EFSDEKRWQNLSKSDLLDINTELANLVLAEKNDDEFARRFDILLLNFQIALLTGSHSLDR
FINRITGSANALLKKQNIPAVAQQKALLTDLQTDVFWQNINVNRLDHIRLALRDLMKYLD
KDQQKIVMTTFEDTLDHSAIVIHEPIGTYVTLQSYKDRVESYVRNHSDHLVIQKLKTNKP
ITETEIHLLESILFEDESLGTKQDYIDTYGDKPLGVFIRNIVGLDMAAAQAHFADFIQAG
NLRADQITFINNIISYLNKNGVIDKSLLFEPPFTYLHDQGLFGVFDDATASKVIKLIDRV
NDNALVAAS
NT seq 3450 nt   +upstreamnt  +downstreamnt
gtgagcaattttcagtttttacaacgcgattttccggctttatatgccgatgcggttgaa
gctgaacaattcactttttcatcgcctaaagcctcagctattttttgtcgctccagctta
gaaaatgccattaattggctgtatgaccatgaacgtaccttaactcgtccctggcgtgct
gacttaagcacattaatgcatgagcatagttttaaatctttatttaacaatactttattt
aacgaacttaatctgattcgcaagacaggtaatcttgctgcacatggcaagtctgtcagc
cagcaggaggctttagcctcactaaaatacctatttcgctttatgcgtcatctggctatt
tattatggtaagtctgttcccgataccctgatatttgatgaggcattaattccccgagca
gatgccgatactggtcaaccacctagcattgagacaaccctagctgaagtagacgctaaa
aatcagctagagcgtgagagcgaacaacaaacacgagatagagctcagcataacccagac
attaaacaagccattgagcaagagcaacagcaattagctgagcgcaaagcctcacgtgaa
caatctgttgatatcaacacagccataccgttgctggtatctgaagcagaaacccgcctc
cgatacattgatttatcactgaaagaagccggttgggacaatctgcaagaggggtatcat
ctggaatatgaagtcaccggcatgccaatcagcaccaataaatcaggtattggctatata
gattatgtgctttggggtgatgatggtttaccgctggctatcgttgaagcaaaaaaaacg
atgcatgatgcccggaaaggcaagcaccaggctgagttatatgcgaattgtttagaaaag
atgaaagggcaacggcccattattttttatagcaatggctttgaaacttatctttgggat
gacactttttaccccgaacgtgaagtacaaggcttttacactaaagacggactgcaatta
ttaatagagcgtcggcagacgcgaaaagacttacgtttatttaaaccaaatgaggccatt
gtcggtcgaccttaccaacttgaagctatcacccgcgttgctgaaaatacggttacagaa
aatagtcagggtgaactcaagggcagggcacgacaaagtttgttagtgatggcaacggga
agtggtaaaactcgaacggctgcagcgattgtcgatatgttgaccaagtgtaattgggcc
aaacgggttttgtttttagccgatcgtaatgcgcttgttacacaggctaagaaagccttt
aatatccatcttccacatttaaccgctattgatctcaccaaagaaaaagaagataacggt
actcgcttagttttttcgacttatcccaccatcatgaatcgaattgatggcctgcgaggt
acggataatcgtttttacggtgttgggcattttgacctgattattgtcgatgaagctcac
cgttcggtgtatcagaaatataaatctatttttgcttattttgatgccttgttgattggt
ttaaccgcaacaccaaaagccgaagttgatcataatacttatggtttatttggcattgaa
gataacaaccccacctttgcttatgaactgaatcaggccgttgccgataagtttttagtg
ccacccaaagcgatgtcggtgccattaaaatttatgcgtgaaggtgttcactacaatcaa
ttatcagccgctgaaaaggcagaatatgaagagaagtttggtgacccaactcaaggtgaa
gcacccgacgagattgaaagtgcagcattaaataaatggttatttaacactgacaccgtg
gataaagttctgcaccatgtaatgaaatcaggcataaaagtgcagggtgatgagaaattg
ggtaagagcattatttttgcaaaaagtcatgctcatgcactgtttatagaagaacgtttt
aataaaaactaccctgaatattcgggtaaatttttacgtgttattgataactatgaaagt
aaagctcaaagcctgctggaaacgttcgctgatgagtatgaagagcacgatccacagatt
gctgtttccgtagatatgatggacacaggtgttgatgctcctcgagtcgttaatctggtg
ttttttaaaaccgtaaaatcagccaccaaattttggcaaatgattggacgagggacgcga
ttatgtcccgatttatttggtccaggattagataaaactgagttttatattttcgattat
tgccaaaactatgagtattttgacatcacgcctgatggtttgcagggcaagattgttaaa
agtttgattcaacaagtgtttgaagcgaaattagaagttgccatgcttattcgtgatgat
atttcacgtactgaagagcagggtccattagctgaaagctatatcaaagaattacatcaa
gctatttcaaatttagacagaaaccgttttgtcgttaaagcgaaactccgttatgtggtc
gagtttagtgatgaaaagcgttggcaaaacttatctaaaagcgatttattagatatcaat
accgagcttgccaacttagtcttggctgaaaaaaatgatgatgaatttgcccgtcgattc
gatatcctgctactcaacttccagatagcattattgaccggctcacatagtctggatcgc
tttattaatcgtattactggcagtgcaaatgcattattgaaaaagcaaaacatacccgcc
gtagctcaacaaaaagccttattaacggatttgcagacagatgtattttggcaaaacatt
aatgttaatcgcctagatcatattcgtttagctttacgtgacttgatgaagtatctcgat
aaagaccaacagaaaatcgtgatgactacatttgaagacacgcttgatcacagcgctatt
gttatacacgagcctattggaacctacgtcacgttacaaagttacaaagatcgtgttgaa
tcttatgtaagaaatcacagtgatcatttggtgattcaaaaactcaaaaccaataagccg
attaccgaaacggaaatacatctcttagaaagcatcttgtttgaagatgaatccctcggt
acaaaacaagactacatagatacttacggagataaaccactaggcgtgttcattcgtaat
atcgttggcttggatatggccgctgcacaagcccattttgctgactttatacaggcaggg
aatttacgtgcagatcaaatcacgttcatcaacaacatcatcagctacctcaataaaaat
ggggtgattgataaatcgttattatttgaaccgccatttacctatctgcacgaccaagga
ttatttggtgtgtttgatgatgctacggcaagtaaagtgattaagttaattgatcgtgtt
aatgacaacgccttagtcgctgccagttaa

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