Methylophaga thalassica: VSX76_10230
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Entry
VSX76_10230 CDS
T09743
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
mtha
Methylophaga thalassica
Pathway
mtha02024
Quorum sensing
mtha03060
Protein export
mtha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VSX76_10230 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VSX76_10230 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSX76_10230 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mtha02044
]
VSX76_10230 (secD)
Secretion system [BR:
mtha02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VSX76_10230 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
WVI84152
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All DBs
Position
1:1778552..1781068
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AA seq
838 aa
AA seq
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MKSLSSRTIVYGLLILFGLLCSLPNILPYSLSQKLPAWYTDTTISMGLDLQGGSHLLLEA
DTKELLNKQYDLLQSELTSELQKQGIYYTSPVISESGLYIPIRKSADIDKSVELASQLAR
NSTDGKKRFDIKKETDGIQISLDQRWVESLVTDVVNQSLEVVRKRLDETGLVDPSITRQG
KQDILVQMPGVADPTKIRELLGTTAKMTFHWAATDTTKNTVTYPDINTDSRYRLETQVAM
EGKHIRDAQVGFNQKTGEPVVNFKLDSEGAKLFGNMTHNNIGRALAIVLDGKVITAPVIR
SEIPGGSGEISGNFTTFEANNLALLLRAGALPVPLHVIEERTVGPDLGSDAIQMGLTTGL
LGAAMVVIFMLGIYGRWGLIACTGLAINVGLIFGALGLLGATLTLPGIAGIILTIGMAVD
ANILINERIREESKRGKAAWKALREGFDKAYTTILDSNLTTLIAVSLLFMFGTGPVQGFA
VTIGIGLVTSMFTAVAVTRLLMEWSIRGKEKQPLKINGFNFLDKLSGKGINFLRGRYAGL
TTSAILSIAAVVLFFQPGLKYGVDFTGGTLVEVYATDLSVEQIRNTLGNHHLSDALIQET
GKAGDFLVRLPVTSTEPGATSQQVNDLKEAVLTIQPDADFPKVDMVGPKVSGNFSDNTIL
AILLAEVGMLIYLTVRFESHFAIAATLTIALDLTKTIGFFALTGVEFNLTAVAALLALIG
YSINDKVVVFDRIRESIRATPDKPIIQMMNESISSTLTRTVFTSVTTFLALLPMGIAGGS
AVSSFALPMLFGIVIGTSSSVFIAAPILYFLSQRRSQKGLALLRPTTEEMREKLAQIP
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattgtcttcacggaccattgtttatggtttgttgattctgttcgggctgctg
tgcagtttacctaacattcttccttattctttgtctcaaaaactgcctgcctggtatacc
gacacgaccatttctatggggttggatttacagggtggttcacacctgcttttggaagcg
gacactaaagagttattaaacaaacaatatgacttactgcagtctgagctgaccagcgag
ttgcaaaagcaggggatttactacacgagtcctgtcatttctgagtcaggcttatatata
cccattcgtaaaagcgctgacatcgacaaatccgttgagcttgctagtcagttagcccgt
aattcaacagatggcaaaaaacgttttgacatcaaaaaagaaactgacgggattcaaata
agcttagatcaacggtgggttgaatcacttgtcacggatgttgttaaccaaagtcttgag
gtggtcagaaaacgccttgatgagacgggactggttgatccgagtattacccgtcaaggc
aagcaagatattctggttcaaatgccgggtgtggcagatcctactaagattcgtgaactg
cttggcaccacggcaaaaatgacatttcattgggcagccactgatacaacaaaaaatacg
gtgacttaccccgatatcaatacggatagccgctaccgtctcgaaactcaggtggccatg
gaaggtaaacatatacgtgatgcccaggtagggtttaatcagaaaaccggcgaacccgta
gttaatttcaagcttgatagtgaaggcgccaaattatttggcaatatgacccataacaat
ataggtcgggcactcgctatcgtgcttgatgggaaagtcattacagcccctgttattcgt
agtgaaataccgggtggaagcggtgagattagtggcaatttcactacctttgaagcgaat
aatttagcgttattattgagagcaggggctttgcctgttccattacatgtgattgaagag
cgaaccgttggtcctgatcttggcagtgatgccatacaaatggggctaacaaccggcctg
ttaggcgcagcgatggtggtgattttcatgctgggaatctatggcagatgggggcttatc
gcatgtacgggtcttgctattaacgtagggcttatttttggtgcactgggtttacttggt
gcaacactcacgctgcctggaattgccggtattatcctgaccattggcatggcggtggat
gccaatattcttattaatgaacgcatcagggaagaatcaaagcgaggtaaagcggcttgg
aaagcgcttcgagagggctttgacaaagcctataccaccattctggactcaaatttaacg
acgcttatcgcggtaagtttgttatttatgtttggtacaggacctgttcagggctttgct
gtgacgataggaatcggtctggtgacttcaatgtttactgccgttgccgtgacacgatta
ctgatggaatggtctattcggggtaaagaaaaacagcctttaaagatcaacggtttcaat
ttcttagataaattaagcggcaagggcattaattttctgcgtgggcgttatgcaggcctg
acaacgtcagccattttgtctattgctgctgtggtgttgttctttcagcctggtctgaaa
tatggcgttgattttactggggggacattagttgaggtttacgccacggatttatctgtt
gaacaaatcagaaatacgctgggaaatcatcatttatcagatgcccttattcaggaaaca
gggaaggcgggggactttctggtcaggctgcctgtgacatcaactgaacctggtgccaca
tcacagcaagttaatgatttaaaagaagccgtactgactattcagcctgatgctgacttt
cctaaagtcgatatggtgggccctaaagtcagtggtaatttctccgataacacgatcctg
gctatcttgttagctgaggtagggatgttaatctacctgacagtgcggtttgaatctcat
tttgctatcgctgcaacattaacgattgctttagatttaactaaaaccattggtttcttt
gcgttaacaggtgttgaatttaatctgacggcagtggcggcattgttagcccttatcggt
tattccatcaatgataaagtggtggtgtttgatcgtattcgagaaagcatacgggccaca
ccggataaaccgattattcagatgatgaatgagagtatttcgtcgacattaaccaggacc
gtatttacgtctgttaccacatttttggcacttttaccgatgggaatagcaggagggtca
gccgtttcaagttttgccttacctatgctttttggcatagtgattggtacaagttcatca
gtatttattgcggcccctattttgtatttcttgagtcaacgcagaagccaaaaaggtctg
gcactgctgagaccaacgacagaagaaatgcgtgagaagttggctcaaattccttag
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