Methylophaga thalassica: VSX76_11050
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Entry
VSX76_11050 CDS
T09743
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mtha
Methylophaga thalassica
Pathway
mtha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSX76_11050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtha02000
]
VSX76_11050
Transporters [BR:
mtha02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSX76_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_25
Mg_chelatase
AAA
nSTAND3
tRNA_lig_kinase
ABC_ATPase
ATP-synt_ab
TsaE
AAA_19
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WVI84314
LinkDB
All DBs
Position
1:complement(1940490..1942517)
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AA seq
675 aa
AA seq
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MSTLLEVKGLRTWFGDNSEPYRAVDGIDFCIEKGQTFALLGESGCGKSMTALSLLRLNPY
PASHIVSGEVRLAGEEILSLSEAEMEKIRGRRVAMIFQEPQSSLNPVLTVGQQIAEVFQW
HFKLDKKAIYTRTLELLHAVGIPDPTERINAYPHQLSGGMKQRVMIAMALAGEPELLIAD
EPTTALDVTIQAQILDLLKEIQQKTGMAILLITHDLGVVAQMADHVAVMYAGQIVESASR
EQFFNNTQHPYTQKLFEALPSEQKRQEKLTVIKGSVPALNRQFKACRFAERCDLAWQHCE
DAEPRWINNNDHGVRCHLYDPDIDAEHIQSQKQVFSSRLSEVVPAKNAILQVSQLKVHFP
IKKGLFQRTIGSVKAVDDITLELRSAETLALVGESGCGKTTVGKGILQLVPVTSGNVIFQ
GQKLNRLSNRALRSVRASMQIIFQDPFASMNPRMTISHVIREGMLTSKMKDSASQEAKVD
ELLTRVGLRADIKHRYPHEFSGGQRQRICIARALAAEPDLIICDEPTSALDVSVQAQILN
LLRDIQHEFGLSFLFITHNISVVDYLAHRVAVMYLGRIVEQGTREEVLNSPKHPYTQALL
AAVPKIAADTHLSKQKLEGELPSPANPPEGCHFHQRCPHVMPVCLEQYPDTTLLSPTHNV
KCFLFEENYGSTNTN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctattggaagtgaaaggtttaagaacctggtttggtgataatagcgagccc
taccgagcggtagatggcatcgacttctgtattgaaaaaggccagacctttgccttacta
ggtgagtctggttgtggaaaatcgatgacagccttatcacttttaaggctgaacccatac
ccagcaagtcatattgtttcaggcgaagtcaggttagccggagaggaaattctgtcttta
tctgaagcagaaatggaaaaaattcgtggccgtcgggttgctatgatatttcaggaacca
cagagttcattgaatccggtgctgacagtgggacaacagattgctgaggtgtttcaatgg
cacttcaagctggataaaaaagcgatctatacgcgaacactcgaattacttcacgcagtc
ggtattcctgatcctactgaacgaataaatgcttatccccatcaactatcaggcggtatg
aaacaacgcgtgatgattgccatggccttggcaggcgaacctgaattactgatcgctgat
gagccgactaccgccttggatgtcaccattcaggcgcaaattctcgacttgttaaaagag
attcaacaaaagacgggaatggctattttattaatcacccatgatctgggggttgttgca
caaatggcggatcatgtcgcagtaatgtatgccggacagattgttgagtcggccagccga
gagcaattttttaataatacccaacatccgtatacacagaaactgtttgaggccttacct
tctgaacagaaacgtcaagaaaagctgacagttatcaaaggcagtgtgccagcattgaac
cgacagtttaaagcttgtcgctttgctgagcgttgtgacttagcctggcagcattgtgaa
gacgctgaacctcgctggattaacaataacgatcacggtgtacgttgtcatttgtatgat
ccagatattgatgctgagcatattcaatctcaaaagcaggtatttagctcgcgattatct
gaagttgttccagcgaaaaacgctattttacaggtcagtcaattaaaagtgcactttcct
atcaaaaaagggctttttcaacgcacgataggatcggttaaggctgttgatgatattact
ttagagctgcgttcagctgagacacttgctctggtgggcgaatcaggctgcggtaaaaca
acggtgggtaaagggattttacagcttgtcccagtgacttcaggtaacgttatttttcag
ggacaaaaactgaatcgcttatcgaatcgcgctttacgttcagttcgtgcatccatgcaa
attatttttcaggatccctttgcttcgatgaatccgcgaatgactattagtcatgtcatt
agagaagggatgctgacttcgaagatgaaagactcagccagccaagaggcaaaagtggat
gaattattaacgcgggtaggtttacgcgcagatataaaacatcgctatccacacgaattt
tccggtggacaacgccagcgtatttgtattgcccgggcattggctgctgagcctgattta
attatttgtgatgaacccaccagtgccttagatgtatctgtacaggcgcagattttaaat
ttactgcgtgatattcaacatgagttcggcctatctttcttatttatcactcacaatatt
agtgtggtcgactatttagctcatcgtgttgcggttatgtacttggggcgaattgttgag
cagggtactcgtgaggaagtgttaaatagcccaaaacatccctacacccaagcattgctt
gccgcagtccctaaaattgcggcagacactcatctgagtaaacaaaaactggaaggtgaa
cttccttctccagccaatccaccagaaggctgccactttcatcaacgctgtccacatgtg
atgcccgtgtgtttagagcaataccctgacacgacattactgagtccaacacataatgtg
aaatgttttttatttgaggaaaattatggatcaacaaacacaaactga
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