Methylophaga thalassica: VSX76_12180
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Entry
VSX76_12180 CDS
T09743
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00910
Nitrogen metabolism
mtha01100
Metabolic pathways
mtha01120
Microbial metabolism in diverse environments
mtha01310
Nitrogen cycle
Module
mtha_M00531
Assimilatory nitrate reduction, nitrate => ammonia
mtha_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VSX76_12180 (nirB)
Enzymes [BR:
mtha01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
VSX76_12180 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
NIR_SIR_ferr
Pyr_redox
Pyr_redox_3
NAD_binding_9
AlaDh_PNT_C
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
WVI84526
LinkDB
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Position
1:complement(2199325..2201757)
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AA seq
810 aa
AA seq
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MREKLVLIGNGMAGVRTLEELLKLAPEKYDITVFGEEPYGNYNRIMLSPVLAGEKTIDEI
MINDLQWYQDNNITLLSGKKVTTIDRLNRVVIADDGTTEKYDRLLLATGSRPFMLPIAGA
DLPGVISFRDIADVDTMLETAKTHKKAVVIGGGLLGLEAANGLMIQGMDVSVVHISDVLM
NQQLDKPASDLMLDELRGKGLKFLMEHQTEAIIGRDRVEKLRFKDGSEIEADLVVMAVGI
RPNIELASSAGIHCDRGIVVDDTMQTFDPRIYAVGECVQHRSQTFGLVAPLFEQAKVCSN
HLAQMGIARYISSVTSTKLKVTGIDLFSAGDFLGDDDTEDLVFKDAARKVYKKLVIKENQ
LVGAVLYGDTVDGAWYFQLMRDGTDISDIRENMLFGQHHLGDSGHGPSNSVDGLADDAEI
CGCNGVCKGDIVQAISKHGLFTLDEVKAHTKASASCGSCTGLVEQLLASTLGSDFNDTPS
KKPLCACTDLSHAEVKAAIIDKSLKTIPDLMSALEWKTADGCHSCRPALNYYMLSSWPNE
YQDDPQSRFINERVHANIQKDGTYSVVPRIWGGVTNPRELRAIADISEKYNVPTVKITGG
QRIDLLGIKKEDLPKMWADLSEAGFVSGHAYGKSLRTVKTCVGSEWCRFGTQDSTGLGIK
AEKMTWGSWTPHKFKIAVSGCPRNCAEATIKDFGIVCVDSGYELHVGGNGGIKVRATDFL
TKVATEEEALEYCAAFMQLYREEAHYLERTAPWIERVGLKHVTSAVVDDEMNRKRLAERF
HDSQKNAQVDPWAEQAAKYKENYIPIKQVV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaagttagttttaatcggtaatggcatggcaggagtgcgtacgctggaagag
ttacttaaactcgcaccagagaaatatgacattactgtatttggtgaagaaccctacggt
aactataaccggattatgctctcacctgtattggctggtgagaaaaccattgatgagatc
atgattaatgatttgcagtggtatcaagataacaacatcaccttgttatcaggtaaaaag
gtgaccaccatagatcgtctaaaccgtgtggtaatagcggacgatggcaccaccgaaaaa
tatgaccgtcttttactggccactggctcgcgtccattcatgttgccaatagctggtgca
gatctccccggtgtcattagttttcgtgatatcgctgatgttgacaccatgctggaaacg
gcaaagacacataaaaaagccgtggtgattggtggtggattgttaggactggaagccgca
aatggtctgatgattcaggggatggatgtcagtgttgtacacatcagtgatgtgttgatg
aatcaacagttagacaaacccgcgtccgatctgatgctggacgaactgcgggggaaaggg
ctgaagtttttgatggaacatcaaacggaagccattatcggtcgtgaccgagttgaaaaa
cttcgcttcaaagatggctcagaaatagaagcggatttggtagtgatggctgtgggtatc
cgccccaatatcgaattagccagttcagccggtatccattgtgatcgtggcattgtggtg
gatgacaccatgcaaacctttgacccacgtatttatgcagtcggtgagtgtgtgcagcac
cggagccaaacctttggcctggtcgccccattatttgagcaagcaaaagtgtgttcaaac
catctggctcaaatggggattgcccgttatatcagttcagtcacatcaaccaaattaaag
gtaacaggcatcgatttgttttctgccggtgactttctcggtgatgacgatactgaagat
ctggtatttaaggatgccgcaagaaaagtctataaaaagctggtgattaaagaaaaccaa
ttggttggcgccgttctctatggggacaccgtagacggtgcctggtacttccaattgatg
cgcgatggtaccgatatctcagatattcgtgaaaacatgttgtttggacagcatcacctg
ggggattcaggacatggtccatcgaattctgtcgacggtttagccgatgatgccgagatt
tgtggctgtaatggtgtctgtaagggcgatattgttcaggctatttcgaagcatggcctg
tttactctggatgaagtcaaagcacataccaaggcatcagcatcctgtggctcatgtaca
ggcttagttgaacagttacttgcttcaacgctaggcagcgattttaatgatacgccgagt
aaaaaaccgctttgtgcctgtaccgatttatcgcatgctgaagttaaggctgccattatt
gataaatccctgaaaacgattcctgatttgatgtcagcacttgagtggaaaacagcagat
ggctgccactcctgtcgtccggctctgaactattacatgttaagcagttggccaaatgag
tatcaggatgatcctcagtcacgttttattaacgaacgtgtccatgccaatattcagaaa
gacggcacttattcagttgtacccagaatttggggcggggtcaccaatcctagagagttg
cgcgccattgcggatatctccgaaaaatacaatgtgcccaccgttaaaataactggtggt
cagcggatagatttactgggaatcaaaaaagaagacttgcctaaaatgtgggcagatctg
agtgaggcaggctttgtctctggtcatgcttatggcaaatcgttaagaacagtcaaaacc
tgcgtcggttctgaatggtgtcggttcggcactcaagactctactggcttaggtatcaaa
gcggaaaaaatgacctggggaagctggacaccccataaattcaagattgctgtttctggt
tgtccaagaaactgtgccgaagcgaccatcaaagattttggcattgtgtgtgtggattca
ggctacgagcttcatgtcggtggtaatggcggtatcaaagtcagagcaactgactttctt
accaaagtcgcgactgaggaagaggcgctggaatattgtgccgcctttatgcagctgtat
cgcgaagaagctcattatctggaacgtactgcaccatggattgaacgcgtcggtttaaaa
catgtgacctcagctgtggtcgacgatgaaatgaatcgtaaacggttggctgagcgtttc
catgattcacaaaaaaatgcacaggtagatccttgggctgaacaagcggccaaatataaa
gaaaactatattcctattaaacaagtggtgtag
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