Methylophaga thalassica: VSX76_12765
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Entry
VSX76_12765 CDS
T09743
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VSX76_12765 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtha03400
]
VSX76_12765 (recC)
Enzymes [BR:
mtha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VSX76_12765 (recC)
DNA repair and recombination proteins [BR:
mtha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VSX76_12765 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WVI84640
LinkDB
All DBs
Position
1:complement(2327388..2330615)
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AA seq
1075 aa
AA seq
DB search
MLKMVYSNDSRQLAAWLAEQLQSAPLSPFEQENIIVQSNELARWLSLYLANEHGISANTE
FPFPSAYIWRLFRQIWPDIPLHSPYAKAPISWRLFALLPELTDEPEFSAIAAYLGEQTDE
LKRFQLAERLADTYDQYLMYRPDWIAEWEQGKSDNWQGLLWQKITADDSEPMHRARLLNQ
LNHLLQTASEKPAGLPERLSIFGISSLPPVYLQTFALMAKFVDITLFYLSPSQHYWGDLI
DAKQQQRQQLELMLEEPEPELNADVGHPLLASLGKQGQEFFRQCQELPHEAETCFAEPNP
DTMLGMLKADMFELDVGQQQAVNADDNSILIQVCHSPMREMEILQDQLLAMFEQQPDLSP
TDIVVMTPDIDVYAPWIEAVFGAADPAHAIPFSIADSSGQQESILLNAWFSILALPQSRF
DVESVLALLECPAIQQRFQLDEAALLWLREWCQQTRIRWGHDAKDKMALELPANDANTWR
AGLDRLLLGYAMPLTEQGEPWRLFDGQLAMDGITGDKARIVAAVSQFITALDDWRQQLSR
PRTPHDWQQHLNRCLDTFFEAEQLDDPLAERELISIRSQLDRLIESTDLAGFEETIGIDV
ILSWQQSHLEPLDNSHRFMGHGVTFCGMVPMRSIPFDVVCLIGMNDDVFPRRQPSLGFDL
LAHHHREGDRSRRDDDRYLFLEALLSAQQTLYISYIGASITDNAEIPPSVLISDLLDYLD
ERFVTEQGDSVIKQLVTQHPLQAFSRRYFDQQHDKLFSFNALQCPKPDTKTESTLWFAEP
LPEPDASWRDISLMQLSQFFMHPARFLCRERLGVRLELDEDELSSREPFELNGLEAWQLR
QWLLESKLSQTTETHISELVHATGMLPQGEFGEEWLHQENRKVEAFVETLMPYLSDERLP
ALPFELEIGEFKLTGQLDNLSAAGLLRYRLSRKKGRDLINGWLEHLILNILKPAGMSLTT
QLVFEDDELCFTPVDNARQLLEQYLDLYWQGCQQPLPLFDKTSLAYAKQALSDKREKAQQ
AAERAWAPAGEFVMAEQDDAYYQCCFPANPLDENFAEIALQVYGPIQQHIEGGQL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatggtttacagtaatgacagcagacaactggctgcctggcttgctgaacag
cttcagtccgcgccgctcagtccgtttgagcaggaaaatattattgtgcagagtaacgag
ctggctcgctggttgtcactgtatctagccaatgagcatggtattagtgccaatacggag
tttccttttccctctgcctatatctggcgtttatttcggcaaatctggccggatattcct
ctgcattcaccttatgccaaagcaccgattagctggcgtttatttgccctgttgcccgag
ttaacagatgagccggaatttagtgcgattgccgcttatttaggtgaacaaacggatgaa
ttaaaacgttttcaattagccgaacggctggcggatacctatgatcagtacctgatgtac
cgaccagactggattgcagaatgggagcagggaaaaagcgacaactggcaagggcttctc
tggcaaaaaatcacggcggatgattccgaacctatgcatcgggccagattgttaaaccag
cttaatcatctattacaaacggctagcgaaaagccggctggccttcctgaaagactcagt
atttttggcatctcctcgttaccaccggtgtatttgcagacctttgctttaatggcgaaa
tttgtcgatatcacgctgttttatttatcccccagtcaacattattggggcgatttaatc
gatgccaaacagcaacagcgtcagcaattggaactcatgctggaagagcccgaaccagaa
ctgaatgcagatgtaggtcatcctttattagcgagcctggggaaacaagggcaggagttc
tttcgtcagtgtcaggaactgcctcatgaggcggaaacctgttttgcagagccaaacccc
gacaccatgctgggcatgttgaaagccgatatgtttgagctggatgtcggtcagcagcaa
gcagtgaatgctgatgataactctatcctgattcaagtctgtcatagcccaatgcgagaa
atggaaattctgcaagatcagctattggcgatgtttgaacagcagcctgatttatcaccg
acagatattgtggtgatgacgcccgatattgatgtgtatgctccttggattgaagcggta
tttggtgcggctgatccggctcatgcgattccatttagtattgctgatagcagcggtcag
caggaaagtattttactcaatgcctggttcagtattttagcgttgccacagtcacggttt
gatgtggaaagtgtgctggctttgctggagtgtccggccattcaacagcgttttcagttg
gatgaagcggctttattgtggttacgcgaatggtgtcagcaaacccggattcgttggggc
cacgatgccaaagataaaatggcattggagttaccagctaatgatgccaatacctggcgt
gccggcttagaccgtttattactgggttatgctatgccgctgaccgagcagggcgaaccc
tggcgcttgtttgacggccaacttgctatggatggcattactggtgataaagcccggatt
gtggcggcagtatcacagtttattactgcactggatgactggcgacaacagctcagccgt
ccacgaacaccccatgattggcaacagcatttaaaccgttgtctggataccttctttgag
gcagaacagctggatgatccgttggccgaacgtgagctgatttccatccgtagccaactt
gatcgcctgattgaaagtaccgatttagctggctttgaggaaacgattggcattgatgtg
atcttaagctggcagcaatcacatctggaacccttagataatagtcatcgttttatgggg
catggcgttaccttctgcggcatggtgccgatgcgtagtattccatttgatgtagtttgt
ctgattggtatgaatgatgacgtgttcccacgtcgtcagccgagtttaggttttgatctg
ttggcgcaccatcatcgcgaaggtgatcgttcacgtcgtgatgatgatcggtatctgttc
ctggaagccttattgtctgctcaacaaacgctttatatcagttatatcggcgccagcatt
accgataatgcggagattccaccgtctgtgttgattagcgatttgctggattatctggat
gaacggtttgtcactgagcagggcgattcagtcataaaacaactggtgacacagcatcca
ctgcaagcctttagtcgccgttattttgatcagcaacatgacaagctgtttagttttaat
gccttgcaatgtcccaaaccagacacaaaaactgaatcgacattatggtttgcagaacca
ttaccagaacccgatgcgtcatggcgagacattagcttgatgcaactcagccagtttttt
atgcatccggcccggtttctttgccgtgaacgtttaggcgtcagactggaactggatgaa
gatgaattgagtagtcgtgaaccgtttgagttaaacgggctggaagcctggcagctcaga
caatggctgctggaaagtaaactcagccaaaccactgaaacccatatttctgaactagta
cacgccactggcatgttacctcaaggtgagtttggcgaagaatggcttcatcaggaaaac
cgtaaagttgaggcatttgtagagacattaatgccctatctgagtgatgaacgtttacct
gctttaccctttgaacttgagataggtgagttcaaactcactggtcagctcgataatctg
agtgcagcagggctattgcgctatcgtttatcacgtaaaaaaggacgcgatctgattaat
ggctggttggaacacttgatcctcaatattctgaaaccagcaggcatgagtttaaccacc
caattggtctttgaagatgatgagctgtgtttcacaccggtagataatgcgcgtcagtta
ctggagcaatatctcgacttatattggcaaggctgccaacaacctttgccactgtttgat
aaaactagtctggcctatgccaaacaagcactgagtgataaacgggagaaagctcagcaa
gcggctgaaagagcctgggcacccgccggtgagtttgtgatggctgaacaggacgatgct
tattatcaatgttgtttcccggcaaaccctctcgatgaaaactttgctgagattgccttg
caggtctatgggccgattcagcagcacattgaaggagggcaattatga
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