Methylophaga thalassica: VSX76_12990
Help
Entry
VSX76_12990 CDS
T09743
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha00550
Peptidoglycan biosynthesis
mtha01100
Metabolic pathways
mtha01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSX76_12990 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VSX76_12990 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
VSX76_12990 (mrdA)
Enzymes [BR:
mtha01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VSX76_12990 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mtha01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VSX76_12990 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WVI84684
LinkDB
All DBs
Position
1:complement(2377189..2379042)
Genome browser
AA seq
617 aa
AA seq
DB search
MASKFTLKDHFRESRLVNGRLLFSGLLSVIIFGIVIFRLVYLQVFEYEHFDSLSNRNRVD
IEPLPPQRGLIYDRNGVLLAENIPTFSLEMVPEKVPDIDQTLKELSQLLALSEEDIDAFK
DRMKRQRRFHHVVIRQRLTEEEVARFSANRYRFPGVDIEGRLIRHYPQNNLFAHAVGYVG
RINERDMELIDQKDYKGTSQIGKTGIEKQYEDTLHGSVGYRQVETNVQGRIVRELMSVPS
QSGDDLFLNLDINLQRVAADSLGDYNGSIVAIDPRNGGVLALVSKPDYNPNSFVSGISSK
EYGELRDSPDRPLFDRALRGHYPPGSTLKPFVALAGLELGVVDEHSKTYCPGWYSLPGSS
HRYRCWKSYGHGMVDMKDAVAQSCDVYFYDLAHTLGIDRLHNFLDYFGFGHRSGIDLPNE
SEGLSPSSEWKRASRNQAWFPGETLISGIGQGFNQTTPVQLAHATATLAMRGISMQPQVV
RATRPAGQTDMNLRNSEIMNNLPMQNSQNWENVVQAMVEVIHGARGTARSVGKDMPFKVA
GKTGTAQVFGIAQDEEYDAETLERKLHDHALFIAFAPADKPEFAVAVVVENGGSGSKVAA
PIARKLIQQYFGLKVDE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaagttcaccctcaaagatcattttcgtgaaagtcgcctggtaaacggacgt
ttattattttccggcctactctcggtcattatttttggcatcgttatctttcgtttggtt
tatctgcaagtgtttgaatatgaacactttgattctttatcaaaccgcaatcgtgttgat
atcgaaccgctgccaccacagcgcggactgatttatgatcgtaacggtgtactgcttgcc
gagaatattccaacgttcagcctggaaatggtgccggaaaaagtcccagatattgaccag
acactgaaagagttaagtcagcttttagctttatctgaagaggatattgatgcctttaaa
gaccggatgaaacgtcaacgccgttttcatcacgtggttattcggcagcgattgacagaa
gaggaagtcgctagattttctgctaaccgttatcgatttcccggtgtggacatcgaaggc
cggttgattcgtcactatccgcaaaataatctgtttgcccatgctgttggttatgtgggc
cgtatcaatgaacgtgatatggaactcattgatcagaaagattacaaaggtacttctcaa
ataggtaagacaggtattgagaaacaatacgaagataccttgcatggcagcgttggttat
cgtcaagttgaaacgaatgtgcagggccgtattgttcgagaattaatgtcggtaccttcg
caatcgggtgatgatttatttctgaatctggatattaatttgcagcgagtggctgctgat
tctctgggggattacaacggctccattgtcgctattgatccgcgaaatggtggggtttta
gccttggtcagcaagcctgactacaatccaaattcgtttgtttcaggtatcagtagcaag
gaatatggtgaattgagagattcgcctgaccgtcctttatttgacagggcacttcgtggg
cattacccccctggttcaacactgaaaccatttgttgcacttgctggcttggaacttggc
gttgtggatgagcattccaaaacctattgtcccggctggtatagtttgcctggcagtagc
catcgctatcgctgttggaaaagttatggccatggcatggtggatatgaaagacgctgtt
gctcagtcctgtgatgtctatttttatgatctggcgcatacattaggcattgatcgctta
cacaactttttagactattttggcttcgggcatcgcagtgggattgatttacctaatgaa
agtgaaggcttgtcaccttccagtgagtggaaacgagccagtcgtaatcaagcctggttc
cctggcgaaaccttgatttcaggaattggacaaggctttaatcaaaccacacccgtacaa
ttggctcatgccactgcgacgctggctatgcgtgggatttcgatgcagccacaggtagtc
agggcaacccgtcctgccgggcaaaccgatatgaatctcagaaatagcgagatcatgaac
aatttgccgatgcaaaatagtcagaactgggaaaatgtggtgcaggcgatggtagaagtg
attcatggcgcgcggggcacagccagatcggtaggaaaagatatgccgttcaaagtggct
ggtaaaacgggcaccgctcaagtcttcggtattgctcaggatgaagaatacgacgctgaa
acgttggagcgaaaactgcatgatcatgccttatttattgccttcgcacctgcagataaa
cccgagtttgcggtcgctgttgtagtcgaaaatggtggtagtggtagtaaagtggccgca
ccgattgccagaaaattaattcaacaatattttggacttaaagtcgatgagtag
DBGET
integrated database retrieval system
