Methylophaga thalassica: VSX76_15085
Help
Entry
VSX76_15085 CDS
T09743
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mtha03000
]
VSX76_15085
Transcription factors [BR:
mtha03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VSX76_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WVI85089
LinkDB
All DBs
Position
1:complement(2805075..2806079)
Genome browser
AA seq
334 aa
AA seq
DB search
MNQEKIWVDDDLDKLEINAVRSKLTDVLEQAAALPMWSQDYTQLDKGQFSGTVTSVACQG
VQIFREGMNRSVDELASAPPDSYVIGLPTIVEGNALWCGSKLNKNSLITLDKNDELLFRT
SHSSEINAAVISEQRLEEYAERVEKVDLRHLMKKVNPVERLPPAIQSRLLAILYIGTEHM
AKNIQDGVSHPNSWRQFEDSVFGICIEALSAVSSNNSRQHEYRVHRYIVKSVRELTLAQH
CDPITIGDICTSLNISRRTLNHAFQQVLGITPVTYMRNIRLHKIRAELQYQSELVNNIAC
VASHWGFWHMSLFARYYRELFGECPSETLERSRQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaaagatatgggtagatgacgatctagataaattagaaataaatgccgta
cgctccaagttgacagatgtgcttgaacaagcggcagcattgccaatgtggtctcaggat
tacacgcaattagataagggacaattttctggaaccgttacgagtgttgcttgtcagggt
gtgcagattttccgtgaaggaatgaaccgttctgtagatgaattagccagtgcgccaccg
gatagttatgtcatcggtttgccaacaattgttgaaggcaatgctttatggtgtggtagt
aagttaaataaaaactcactgattaccctggataaaaatgatgaactgctatttagaact
tctcattcatctgaaatcaatgccgcagtcatttctgaacaaaggcttgaagaatatgct
gaaagggttgaaaaggtagatcttcgtcatcttatgaagaaggtaaatccagttgaaagg
ttgccacccgccatacagagccgcttgttagccattttatatattggcacagaacacatg
gcgaagaatattcaggacggggttagtcatccaaacagttggcgtcaatttgaagactct
gtattcggtatatgtattgaggcgctctcggcggtaagtagtaataatagtcgtcagcat
gaatacagagttcaccgttatattgttaaaagtgttcgtgaactcactcttgcgcaacac
tgtgatccaatcacaatcggtgacatttgcacttctttgaatattagtcgacggacacta
aaccatgcttttcagcaagtgctcggaatcacccccgttacttatatgcggaatattcgt
ctacacaaaatcagggctgagcttcagtaccagtctgagctggttaacaatattgcttgt
gtagcttcacactgggggttttggcatatgagtttattcgctcgatattatcgggagtta
ttcggtgagtgcccgagtgaaacgctcgaaagatctcgtcagtaa
DBGET
integrated database retrieval system
