Methylophaga thalassica: VSX76_15345
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Entry
VSX76_15345 CDS
T09743
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mtha
Methylophaga thalassica
Pathway
mtha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VSX76_15345 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtha03019
]
VSX76_15345 (orn)
03009 Ribosome biogenesis [BR:
mtha03009
]
VSX76_15345 (orn)
Messenger RNA biogenesis [BR:
mtha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VSX76_15345 (orn)
Ribosome biogenesis [BR:
mtha03009
]
Eukaryotic type
Pre-60S particles
RNases
VSX76_15345 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WVI85140
LinkDB
All DBs
Position
1:2852120..2852677
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AA seq
185 aa
AA seq
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MAKSKNNLIWIDLEMTGLDTNNDYIIEIATIVTDAQLNVLAEGPILAIHQDDAILNGMDE
WNTRQHGKSGLVERVRNSSLNEAEAEQQTIEFLKKYVPAGVSPMCGNSICQDRRFLARCM
PELEAYFHYRNLDVSSLKELARRWAPKVEKSFKKRSSHLAMDDIKDSIRELEHYREHFIK
LPEAE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagtaaaaataatctaatctggatcgatctggaaatgaccggtcttgatact
aataatgactatatcattgaaattgccaccattgtgacagatgcacaactcaatgtctta
gctgaaggccctattttagccattcatcaggatgatgccatattaaatggtatggatgaa
tggaatactcgccaacatggcaaatctggtctggttgaacgtgttcgcaacagctcgctc
aacgaggctgaagccgaacaacaaaccatcgagtttctgaagaaatacgttcctgccggt
gtatcacccatgtgcggtaacagtatctgccaggatcgtcgctttctggcccgttgcatg
ccagagctggaagcctattttcactaccgtaatcttgatgtgagcagcctgaaagaactg
gctcgtcgttgggcgccgaaagtggaaaagagtttcaaaaaacggtcttcccacctggca
atggatgatatcaaagactccattcgtgagctggaacactaccgagaacatttcatcaag
cttcccgaagccgaataa
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