Methylophaga thalassica: VSX76_15355
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Entry
VSX76_15355 CDS
T09743
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mtha
Methylophaga thalassica
Pathway
mtha03030
DNA replication
mtha03430
Mismatch repair
mtha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSX76_15355
03430 Mismatch repair
VSX76_15355
03440 Homologous recombination
VSX76_15355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtha03032
]
VSX76_15355
03400 DNA repair and recombination proteins [BR:
mtha03400
]
VSX76_15355
Enzymes [BR:
mtha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSX76_15355
DNA replication proteins [BR:
mtha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSX76_15355
DNA repair and recombination proteins [BR:
mtha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSX76_15355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Rv2179c-like
DNA_pol_A_exo1
CGI-121
Motif
Other DBs
NCBI-ProteinID:
WVI85142
LinkDB
All DBs
Position
1:2852895..2854367
Genome browser
AA seq
490 aa
AA seq
DB search
MTKLSSFPEHMILLDCETTGGRASHDRITEIGLIEVIDGEVKDKWQSLINPQRPIPPWII
KITGIDDAMVIDSPTFDEIASELYERLQGTILVAHNARFDYSFLKQEFKRAGYDYSAKTL
CSVKLSRRVYPQHQGHSLDKIIQRHQIAIPDRHRAMADTDAILSYFTIIQQQVDEALIQQ
SIAEILKRPSLPSHLDNQLIQKLPESPGVYQFYDESGALLYIGKSVNIRERVLSHFSADH
RHHKELDISQQLHHIDWIETPSDFGAQLLENSYIKQTSPRYNRRQTKIKKLYQISRTINK
EGYAELDVILADMTAASDITSKYGLFRSKKQAQTKLLALIMQYKLCQRLCHIEKKSSGSC
FAYQLKKCLGACCAKEPAQRYNLRVDMALSHIKNQQWPWSTAIIVAEQSTSTQSDVTHYH
LIDQWCYLGQVDKQSEPQTYLTNQQGPIFFDIDTYKILLRFLTPAKAANFPYLTIHPLEH
QSPIIMDGWG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgactaaactgagcagtttccccgaacatatgattctattggactgtgagaccacaggt
ggtcgcgccagtcacgatcgcattacagaaataggtttgatcgaagttattgatggtgaa
gttaaggataaatggcaaagcttaattaatcctcagcggccgattcctccctggataatc
aaaatcaccggaattgatgatgcgatggtaattgattcacccacatttgatgagatcgcc
agtgaattgtacgaacgattacaaggcacgattctggtcgcccataacgcacgttttgac
tacagttttttgaagcaagagttcaaacgtgccggctatgattattctgcaaaaacctta
tgctctgtaaaactgagccgacgggtgtatccacagcatcagggccatagtctggataaa
atcatccagcgtcatcagattgctattcctgacagacaccgggccatggcagataccgat
gccatcctgtcttatttcacaattattcagcaacaagttgatgaagcactgatacaacaa
agcatcgccgagatattaaaacgacccagtctgcccagtcatttagataatcagctcata
caaaaattgccagaaagtccaggggtatatcagttttatgacgaaagtggcgcactcctc
tacattggaaaatccgtcaatatcagagaacgtgtgctcagtcacttttctgccgatcac
agacatcataaagaactggatatcagtcagcagttgcatcatattgactggatagaaaca
ccctccgactttggcgcgcagttgctggaaaacagttatatcaaacaaacttcaccgcgt
tataaccgtcgccagacgaagataaaaaaactgtaccaaatcagcagaacaattaacaaa
gaaggttatgctgaattagatgtcattctggccgatatgacagctgcctctgatatcact
agcaaatacggtttatttcgcagtaaaaaacaggctcaaacaaaattactggccttaatt
atgcaatataaattgtgtcaacgtctctgccatattgaaaagaaatcgtcaggcagctgt
tttgcttaccaactaaaaaaatgcctgggagcgtgttgtgctaaagagccagcacagcgc
tataacctgcgtgttgatatggccttgagtcatatcaaaaatcaacaatggccttggtca
acggccatcatcgttgcagaacaatcaacatcaacacagtctgatgtcactcactatcat
cttatcgaccaatggtgttatttggggcaagtggataaacaaagtgagccacaaacctat
ttaacgaatcagcagggcccgatattctttgatatcgatacctacaagattttattacgg
tttttgactcccgctaaagccgctaactttccttatctgacaattcatcccctggaacat
caatcacctatcatcatggatggttggggttaa
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