Methylophaga thalassica: VSX76_16110
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Entry
VSX76_16110 CDS
T09743
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
mtha
Methylophaga thalassica
Brite
KEGG Orthology (KO) [BR:
mtha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtha03016
]
VSX76_16110 (miaB)
Enzymes [BR:
mtha01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VSX76_16110 (miaB)
Transfer RNA biogenesis [BR:
mtha03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VSX76_16110 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
CodY
Motif
Other DBs
NCBI-ProteinID:
WVI85281
LinkDB
All DBs
Position
1:complement(3015578..3016918)
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AA seq
446 aa
AA seq
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MAGKLYIRTFGCQMNEYDSSKMAEVLAASHQLEPTDIPEEADVLLLNTCSIREKAQEKVF
HQLGRWKRWKDTRPDLVIGVGGCVASQEGEAIRQRAPYVDLIFGPQTLHRLPAMLEEVKI
SRKPSIDISFPEIEKFDNLPAPKADGPTAFVSVMEGCSKYCTFCVVPYTRGEEVSRPVGP
ILREIRQLAAQGVREVNLLGQNVNAYQGVIEGDETADLALLIHYVAAIDGIERIRFTTSH
PVEFSDSLIEAFAEVPELVNHLHLPVQSGSDRILTMMKRGHTALEYKSKIRRLLEVRPNL
SMSSDFIVGFPNETEEDFQATMDLINEIKFDHSFSFVYSARPGTPAAAFVDSVSEEEKKR
RLQIMQDRLRELEDEHAKAMVGTTQRILVEREAHRGGGDMAGRTENNRVVNFPGDRSLIG
QFVDVRIEEAFSNSLRGELLADSVAL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaaactttatatcagaacattcggctgtcagatgaatgagtatgattcatca
aaaatggcagaagtcctggcggcatctcatcaattagaacccacagatattccagaagaa
gcggatgtcttacttcttaatacctgctcgattcgcgaaaaagcgcaggaaaaagtgttt
catcaactcggtcgctggaaacgctggaaagatacacgtcctgacttggttattggtgtg
ggtggctgtgtggcaagccaggaaggtgaagcgattcgtcagcgtgcgccctatgttgat
ctgatttttggaccacaaacattgcaccgtcttccagctatgttggaagaggtcaaaatc
agccgcaaacccagcattgatatctcattccctgagattgagaagtttgacaatttacct
gcaccgaaagctgatggcccaaccgcgtttgtttcggtgatggaaggttgcagtaaatac
tgcacattctgcgtggtgccttatacccgtggtgaagaagtcagccgcccggttggtccg
attctgcgtgaaattcgtcagttagcggcgcagggtgtgcgtgaagtgaacctgttaggc
caaaatgtgaatgcttatcagggggtgattgaaggtgatgaaaccgctgatctggcgctg
ttaattcattacgtcgctgcaattgatggcattgaacgtattcgctttaccacctctcat
ccagttgagttttctgacagcctgattgaggcatttgccgaagtgccagagttggtgaat
catctgcatttaccggttcagtcgggttctgatcgtattttgacgatgatgaagcgtggt
cataccgcgttggaatataaaagtaagattcgccgattactggaagtcagaccgaattta
agcatgtcgagtgactttattgtcggtttccctaatgaaacggaagaagactttcaggcg
accatggatttaatcaacgagattaaattcgatcattcattcagctttgtttatagcgct
cgccctgggacaccggcggcagcattcgtggattccgtttccgaagaagaaaagaaacgt
cgtctgcaaatcatgcaggatcgtttacgtgagttggaagacgagcatgccaaagctatg
gttggcaccactcaacgtattttagttgagcgcgaagctcatcgcggtggtggtgatatg
gccggtcgcacagaaaataaccgggtagtgaatttccctggtgaccgcagtcttatcggt
caatttgtggatgtgcgtattgaagaagccttctccaactccttgcgcggcgaattactc
gctgatagcgtagcactttaa
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